Detailed information of Actinostola_18397 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_18397E3 UBIQUITIN-PROTEIN LIGASE ATL42scaffold682_size241708147172155395+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00347Ribosomal_L6Ribosomal protein L6DomainInterproscan
PF02225PAPA domainFamilyInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003137DomainPA domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR020040DomainLarge ribosomal subunit protein uL6, alpha-beta domainInterproscan
IPR036789Homologous_superfamilyLarge ribosomal subunit protein uL6-like, alpha-beta domain superfamilyInterproscan
IPR046450Homologous_superfamilyPA domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46539E3 UBIQUITIN-PROTEIN LIGASE ATL42Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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