Detailed information of Actinostola_17868 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_17868SPLICING FACTOR 3A SUBUNIT 2scaffold626_size4369587034594652-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07969Amidohydro_3Amidohydrolase familyDomainInterproscan
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan
PF16835SF3A2Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000690DomainMatrin/U1-C, C2H2-type zinc fingerInterproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR011059Homologous_superfamilyMetal-dependent hydrolase, composite domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR013108DomainAmidohydrolase 3Interproscan
IPR031781DomainSF3A2 domainInterproscan
IPR032466Homologous_superfamilyMetal-dependent hydrolaseInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR052092FamilySplicing Factor 3A Subunit 2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR23205SPLICING FACTOR 3A SUBUNIT 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000245Biological Processspliceosomal complex assemblyInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016810Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bondsInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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