Gene detail

Detailed information of Actinostola_17762 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_17762	OS-9-RELATED	scaffold614_size263234	189157	199559	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_17762

AATAAAGGATGGTGGACATATGAACTTTGTTATGGGGTATCTGTATCACAATACCATGAAGAAGGTAACACAGTAATTGGTGAAAGGATTTCATTAGGTCTCTATGGCTCTCAAACAGACTGGGACAAACAGGAAATTGAGTTACCTTATTCAAAGAACAGTTCCAGACGTTTTCATTCACAATTCTTTGAAAATGGCACAACGTGTGATTTGAATGGAGCGCAAAGAGCGACAGAAGTCAAGTTCAAATGTGAAGTTGACGCCAAGGATCATGTTGTCATGGTAGATGAGCCTTCGTCATGTAACTACGTCATGGTTGTTCACACAGAGAAGCTGTGTAACCACCCGCTATTTAAGCCCCCAGCAAACCGCAAGCCACTAGCGATTACGTGCTCGCCGGTGCTTTCTGAAGAACGCTATCAAAAATATTGGATATCAGTTGAGCTTGAGAAAAAGGTGAAAGCCAAGGCTATAGCAGATAGAATTCGTAACATGCAAGCATTACAGGACCAATACGACGATGACTATGACGACATCCCAAAACCCAAGAAAAGAAATCCTTACAGAAGTCAACTATGGCCTTGGGACAAACCCGGTGTCGAGAGCCTGGACGAAACACTGATAAGTGGCGACATTGATAAGAAATCAATGACAGTCAATCGTATGGATATCATAAAGGGACGAAAAATGTTGAAAGACGGTGAGGAAGACAAACAAGATGGAAGTGTAACGATTATGAGTCGAAGAATGGTTCAAGATCGTAAACCCACCGAACAAAAACCTGACACCATAGCGGATGTTGTCAAAGAAAACAAAGAAGAAAGTCAAGAACAGACAAAGAATCAAGACGAAGCAAAGGACGAAATCCCAGACGGGAAAGCTGCATCAGAAGCAGAGGCCGGCATCAATGAAAATGAACAAAAACCATTTGATAAGAGTGAATCGGATGGCAAAGATGAACTACCACAAGGCGAACCATCAGTACAGGAAGAGGTCAACTCTAAGCCGCCCTTCGAAATATTTACTCCATCTTCTTCATCTAAAATCATTGGCAAAGTAGATGATGAAGAAGCAAAAAGTGTTGGCGAAGAAGTGCAGAGTTCACAAGGTGAAACGACTGTTGGGGAAAGCAGCGAAGACGAGAGCACCAAGAAGGAAGAAATGAAGAAAGAGAAGAAGAAAACGAAAAAGACTCTTGAGGACGAGTGGAAAGATGCATTAGTCAAAGCTAGAACACAGTTAAGAAGTGTCGTCAGGAAGCAACTAAAAGGGATGGGTGTAGATCCTGATGCGCTGGAAAACAGATTTAAAGACATGTTGGGTAGAACAACTTCAAAACCCAAAGACATGAAACTAAAAGGAGAGCAGCGTGATGCTGTTGTTAAGGAAGAAAGCAAACCTGAAGCAGTTCCAACTATAGAAGGACTGAAAGCTGCAGTAGACAATAAACTAGACAAACTTATGCAGTCTGTAGACCAGATGGAGAAAGATGGAAAACTGAACAAAAACAGCAAAGCAAGACGCGTTCTGACTAACATTCAGAAGATCATGCAAGGAATGGATCACCAGAATGTATTACTGATGAAGAAAGAAGAAACCATCCAGCGAGAGCTTGAAAGACATTTCGACGAACTCAAAGGTCGCTTCAACATGGAGGTAGCAATGATGAGAAGGTTTATCGAGGAGCTGGAAGACAGAGACAGTGATTCCGGCTACAGAGAAGATGATTATTTGAAAACTATTGTGGAAAAGCTGAAGAACTCTCTGCATCGTTTTGATAAGTCAAACAGAGCTTTAACAGACGACATGGAGGCAGTCAAGGAACTAAACAAAGAAGTGCATTCCAAAATAGATGACATTGTGTCGGGGGAGACCGATGACAAGAAGACAAAAAGCCCACATTTCTTTCGTCTAGCTGGGAAAGCCAATCTACTGCTCCGTAGACTGCTGCAACGAAGCGCGCAACTGGACAAAGAAATGCGCTCGATGAAGGACATAAGCGACCATATTAAAGCCAGGAGAGAGGAATATGCAGATGCAATGGAAGACGATCCCGACATGAGGGAGAATAAGAGATTAAAGCAGGAAGCCGAGGCCAGACTTAGTGGAATCGTTGACAAGCTGAAGAAAATGATAACCGAGGCAAATACCGGCGAAGGACCGGGGAGTACTGATACAGAACCTGATGATCTTCCTGATATGACCACAGACAGACCATCGACTGTCGACAACATTAAAGTACGTATCACCAAGATCAAAGGGGACGATGGGAAGGCAATGTGGACTGATGGGAAAGACGAAGACGATCTGGCTGAGGGTAGCCAGATTGAAATGGAAGACAGACTAAAGAAGGCGTCTAAGAAAATGGAAAGAATGGTCAAGAAACAACTTGAAAGTGCTGGCATTAATCCAGGGGGTAAAGTTCGTATAAAAATCATAACGTCACGTGATGCTCTAGAAAACTTTGGTGGTAGGAAGGGCATGGAGATACTGAGTGAGGAAGAAACATCACAGTTTAAAAAGATGATTCTGAATTTAATGGGTGGAAGTAGCGAAGCAGGAGATGAGAAAAAGCGACAGGTAAATATGGAGAATAATTACAATCTTGTATGGAGTGAAAATGGCATGAAGAAGGCTCCACCGCCAGAAGACGACGAGCCAGATGCCGAGCTGGTCTTCGACGACACAGACGTGTTTTAG

Transcript

Actinostola_17762

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07915	PRKCSH	Glucosidase II beta subunit-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009011	Homologous_superfamily	Mannose-6-phosphate receptor binding domain superfamily	Interproscan
IPR012913	Domain	Protein OS9-like domain	Interproscan
IPR044865	Domain	MRH domain	Interproscan
IPR045149	Family	Protein OS-9-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15414	OS-9-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005788	Cellular Component	endoplasmic reticulum lumen	Interproscan
GO:0030433	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0030968	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan
GO:0030970	Biological Process	retrograde protein transport, ER to cytosol	Interproscan
GO:0036503	Biological Process	ERAD pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-