Gene detail

Detailed information of Actinostola_17700 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_17700	HEAT SHOCK PROTEIN 70KDA	scaffold609_size265112	109290	134657	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_17700

ATGAAGCGATGTTTGAGTCACTACCAAAGCGCTGGTGGATTTGCCAGCATTTGCCGGAATGGCGGCCCTGATTCCTTGATTACTAAGGACACATTTCTACGCAGCCGTTTGTTCAGTAAAAACATGGCTTATAAAATAGTAAGAGCATCAAATGGCGATGCATGGTTTGAGGTCAATGGTCACATGTACTCTCCCAGTCAAATTGGAGCCTTTACTTTAATGAAGATGAAAGAGACTGCTGAAAGCTATCTTGGCTGCACAGTTACAAATGCCGTGGTCACCGTGCCAGCTTACTTTAATGATTCCCAAAGACAGGCAACCAAAGACGCTGGTCAAATTGCTGGTTTAAATGTTTTAAGAGTGATTAATGAACCCACTGCTGCTGCTTTAGCTTACGGCATGGACAAGACAGAGGATAAAATAGGGGGAGTGTGGGAACAAGGAGAAGTGATCAGTCGATGGATTCTTCGAGTCGAATTATACGCCGCTTCACAACAATGGGATGGCAAGAAAACCGCTGGCAAAGCAGCACTCAATCTTCCAAGCGACAAGCTTGACGTTTTACTGGCGCTACCCGGCGAGGAACGCACTAGTTGGAAAAAGATCAAAGAGATTCTACTCAGAGAATACCAACCTTCAAAGGCCAACAGTGAAGAACTCTTCTTAGCCAGGATTAAGAAGGACGGCGTGGATGTGTTGCGGAACTACGACAACATGACGATTGACTGGGAAGCACAGGTTTTACACCTGGGAGGATACTCGATTCCCTTAGAAGACCGACTGCTAGGAGCTCCTAGGCAACCGACAGAGGTATGCTTGGTGTCAGACACAGTAATTCCTGCGCGTTCGCAGTGTGTCATCACAGCTGCCTCCAAAGACTTTGGCACAATGCCACAGGACACCATGTTCGTCCCCTACCAAGACAAAATGGCTAAACAAAACGTCCTTCTCGGTGCAGGAGTGGTGGCACGAAGTATAAAAAACGAGATCCCCATTTTAGTCATGAACAACAGTGCGTTGCCCATAAAGCTTTACAACGGTACGTCCATCGGACACCTATCTACGGTTACGGTGCAGGATGAAGAGGAAGAAACTAAAAGACCGAAAGTGACAGAACGAAGGGAACCTGCTAATGTGGACTTGTCAGACAGCTGCCTCACGGCCAAACAGAAAGAAGCAGTAACAAGGGTCCTTAGTGACTTTCGCGACACCTTCGCGAATGACGTAACAGAAGTCGGGAAAACAGACAGGATCAACTTTGAAATCGACACGAATAATCACCCCCCAGTGGCCCTGAAACTACGGCGCACCCCATTTGCACTGCGAGACGAAGTAGACAGACAGATACGAGAAATGGAGGAAAGAGGAGTCATCCGCGAGGAATGTCTGGACTCACTAGGAGGCTCAGCTATGTTCAGCACTTTAGATCTACACAGTGGCTACTGGCAGATACCGATTGACCCTAAGGACAGACACAAGACAGCATTCACCACAGAATCTGGACACTGGGAATTCGTCGTCGTGCCCTTCGGTGTCAAAAACGCACCAGCGGTGTTCTCTCGCCTGATGGCTGATGTCATGAGAGCCAACAGCGCGGTGGAGAGATTAAACCGTACTATTGGTCAAATGCTCAAGAAGACACAAAAGGAAAACGACCTAGACTGGGATCTCAAAATACCATTTGTGCGCTTCAACTATTTGAATCAGGAACACTCGTCAACAGGGTACTCGCCATTTTACCTCACGTTTGGGCGGAACCCAAGAACTCCTGTGCTAGTCAAGGATAGTAGCATGCCTAAACCCAAAACAAGAGACAGACTTCAAAAGGAAAAAAGGGCAGAAAAGAGCAAGGAGGTTCTTACTACACAAAGGTTCAAGGTTGGGGATGAGGTACTCATCTACTCACCAACAAGAAAAGGACAAGTGAAGTCACTCCATAGAGCATGGGCAGGGCCCTACATCGTTATCCAGTGCCGCGAAGGGAACACATATCGTATGAAGAACTCTGACAATTTTCGACAAAGATTCATTCGTCACCATGATCAGCTACGTTACCTGCACTCTAGACCACTTCATCTTACCAAACCGAGCCAAGCTGATGTGACAGATGACAAACCAGTTCATGATATACAGCCTTCTGGAGTACCAAAGAAACCCACTACAAGCACCAACACGGTTCCACCCTCGACAAGCCTCCCGACCTTCGGAGATTCCGACGATGAAAGTGATGAGGACAGTGACAACGGGGAAGGTGAACCACAAGAGAATGGAGAAGCCCCAGGAGGATCAACCGAACCAGAAACAGCACGAAGAAGTCAAAGACAAAGGCGGGAGCCCCAACGCTTTGGAGACATTGCAGTATATGATCTTGGTGGTGGTACATTTGATATCTCAATCCTTGAGATACAGAAAGGAGTGTTTGAAGTAAAGGCAACTAATGGCGACACATACCTTGGTGGTGAGGACTTTGATCACTGTCTTCTCAAATATCTTATTTCAGAATTCAAGAAAGAAAGTGGCGTTGACCTTTCCAAAGATCCCATGGCTCTTCAAAGACTCAGGGAAGCTGCTGAAAAAGCTAAGATTGAACTCTCTTCTGCAGTGCAGACTGATGTAAACTTGCCATATGTCACTGTTGATGCAAGTGGTCCCAAACACATGAACATCAAGCTATCAAGAGCCAAGTTTGAGTCCCTTGTCAGTGAGCTCATCAACAGAACCGTAATACCATGCAAGAAATGTCTACAAGATGCTGAGATAAGGAAAAGTGATATTGGAGACGTATTACTTGTTGGTGGCATGACTAGAATGCCTAAGGTTCAACAAGTTGTCCAAGAAACCTTTGGAAGACAGCCAAGTAAAGCTGTCAACCCTGATGAAGCAGTAGCCATTGGTGCAGCTATTCAGGGAGGTGTACTTGCTGGTGATGTCAAGGATGTTTTATTGCTTGATGTGACTCCCTTATCTCTTGGTATAGAGACCCTTGGTGGTGTATTCACTAAACTCATTACACGAAACACAACAATCCCAACTAAGAAAAGCCAGGTCTTCTCCACTGCTGCTGATGGCCAAACCCAAGTGGAGATCAAAGTTCATCAAGGAGAAAGAGAGATGGCTGTCGATAATAAGATGCTTGGTCAGTTTCAACTGGTTGGTATTCCTCCAGCACCAAGGGGTGTCCCTCAGATAGAAGTCACCTTTGATATTGATGCCAATGGAATAGTCAATGTATCAGCCAGGGACAAAGGAACAGGCAGAGAACAACAAATTGTTATCCAGTCATCTGGTGGCCTCAGTAAAGATGCAATTGAAAACATGATCAAAGAAGCAGAGAAACATGCAGAGAGTGACCGACAGAAGAAGGAATCCACCGAAGCTATCAATCAAGCTGAATCTATGATCCACGACACAGAAGCAAAGATAGAGGAATTCAAAGACCAACTACCAAGTGACGAGACTGAAAAGTTGAAAGAAGAGATTGCTAAAGTTCGTGAAGTGTTGGCGAACAAGGAGAATGAAACTGGAGAAACAATCAGACAAGCTTACAGCGAACTACAACAGAAATCTTTGAAACTATTTGAGATGGCGTATAAAAAGGTAGGTTTTACAGTGAAGGTAGTGGTCAGTAAAGACATTGATCATTGGTTTTACAGTGAAGGTGGTGGTCAGTAA

Transcript

Actinostola_17700

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00012	HSP70	Hsp70 protein	Family	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR013126	Family	Heat shock protein 70 family	Interproscan
IPR018181	Conserved_site	Heat shock protein 70, conserved site	Interproscan
IPR029047	Homologous_superfamily	Heat shock protein 70kD, peptide-binding domain superfamily	Interproscan
IPR029048	Homologous_superfamily	Heat shock protein 70kD, C-terminal domain superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR043129	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19375	HEAT SHOCK PROTEIN 70KDA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-