Detailed information of Actinostola_16537 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_16537TNF RECEPTOR ASSOCIATED FACTORscaffold49_size874527413444511195-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01756ACOXAcyl-CoA oxidaseFamilyInterproscan
PF02176zf-TRAFTRAF-type zinc fingerFamilyInterproscan
PF02770Acyl-CoA_dh_MAcyl-CoA dehydrogenase, middle domainDomainInterproscan
PF21355TRAF-mep_MATHTRAF/meprin, MATH domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001293DomainZinc finger, TRAF-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR002083DomainMATH/TRAF domainInterproscan
IPR002655DomainAcyl-CoA oxidase, C-terminalInterproscan
IPR006091DomainAcyl-CoA oxidase/dehydrogenase, middle domainInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan
IPR009100Homologous_superfamilyAcyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR036250Homologous_superfamilyAcyl-CoA dehydrogenase-like, C-terminalInterproscan
IPR046373Homologous_superfamilyAcyl-CoA oxidase/dehydrogenase, middle domain superfamilyInterproscan
IPR049342DomainTRAF1-6/MEP1A/B-like, MATH domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003997Molecular Functionacyl-CoA oxidase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0006635Biological Processfatty acid beta-oxidationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan
GO:0033209Biological Processtumor necrosis factor-mediated signaling pathwayInterproscan
GO:0070534Biological Processprotein K63-linked ubiquitinationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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