Gene detail

Detailed information of Actinostola_16418 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_16418	PROTEIN CBG26694	scaffold48_size880855	397124	456100	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_16418

ATGTCAACAATGGAACTTGACCACAACAATACCCAGAAACAATGTAAACATCACCTGTCAATCAAATTATTTAACGTCATAGGTACCAATGAACAACAGTTGATAGACATCATTGCACAAAGATCCAATGCACAGCGTGTAGAGATAAGAAAGAGGTACAAAACTATGTTTGGTAAAGACCTGATGAACGACTTGAAATCAGAATTAAGTGGAAACCTTGAAGACTGCCTTCTTGCTTTGTTGGAACCATCTTCTTTGTATGATGCTAAATGTCTTAGAAGAGGCATGAGAGCCAACAGAGATGAATCAACAACAGTAGACTTGGAAAAGGCTAACAAAGAAGCACAGGACCTGTTTAAGGCAGGAGAAAAGAAATGGGGCACTGATGAATCCCGCTTTAATGTTGTCTTGGCCAGTAGAAGCTTTGTACAGTTGCGAGCCACTTTTGATGAATACATCAAGGTTAGCATCATCTATGTTATTGTACATCAAGTAGTGTTTATTCTGTGTTTGGTTTGTTTAGTCCAATGTGCTCGTAACCCTGCTGATTACTTTGCTGATCGTCTGTGGAAATCAATGAAAGGAGCTGGTACCAATGATGCATTGCTGATCCGTGTTATTGTCTCACGCTCAGAGGTAAATGTGTATTTAACAGAATTGCCTCCGCACCTCACGTTTGTATCGTGTTTCATCGGTGTCAGTTTTATGGGAGACGAAGAGGAACCGAACACAGCTGACGGCCTTGACATCTTCGATGGTCTCACCTTTGAAAGTGATGCAGAGAAGGATGATATCGATGTTGTGATTAAAAAGCTTGAGGAATACTGCATTGAACAAAAGAACGAGACCTTTGAACGCTACAATTTCAACGTTCGAGTACAACAAGAGGGGTCAACCGATGAGATAGCTGACAAGAACCATGATGATTACCTCAAAGCTGTCCTCGGAAGGTGTCGTCTCGAGGGTATAAAGCTAAACAAAGAGAAAATGCAGTTTAAACAGAAACAAGTATCTTACATGGGACATGTCCTTACAGACGAAGGTCTCAAGCCAGACCCTAACAAGATAAAGGCCATTGTTAACATACCTATCCCTACTGACAAAGAGGGAGTTCAGAGAATCCTCGGCATTGTCAACTATGTGCAACGATTTGCACCCAAGCTCACAGATGTGACCAAACCACTCACAGATCTCATCAAGAAATCAAATGAGTTCTGGGATGAGACCATACACGGTAAAGCTCTACAGGATACTAAACAGATCCTTACAGAAGTCCCTGTGCTGATGTACTTTGATCCAGAGAAACAATCAGTACTACAATGTGATGCCTCCAAAGGTGGACTGGGCGCATGCCTGATGCAAGATGGACAACCCATTACATATGCATCAAGGGCATTAACGCCAACGGAAGTAAACTATGCCCAGATTGAAAAAGAACTGCTATCTGTTGTCTTTGGGATGGAGAAGTTCTCAGAATACCTGTATGGAAGAAATGTCCTAGTTGAATCGGACCACAAGCGATTGGAATGCATTGCGAAGAAAGAAGATGCAGCCCAGAACGTTAACCTGCCTGAAGTCCAGAACCCGCCTCAAGGCCAGAACGCCCCGGCAGCGGATCAAAACGCCGACGCAGCAGGTCAACCTCTAGAGTGTATTCCTACCATGGAGGAAAGATTAAAGAAGCTTGAGGACCAGGGGAAAGCAAACTCGGTAGCCATGGCACTGCAGTCATTACACAGAACTTTGGACAAAGCCAGGTTCGACGCGGACGAGGCTTTGGCCGACTTGGAGACCCTCGTCCGCCAGGCCAAGGGCTGTTTATTTGACCCGTCTGCACATATCAACTCTCAACGACCAAGACCCATGAGGTGGGTCACCAGGGACCTGACCCCCCTGGAGGCTATGGAAGGGATATCAGCCCCACCCTGTGACTTTGATTTCATTGACAAGATTGCACAGGGTGCCCAGTCGCCTAACATCGCAGATCTGCCTTTCCGCGACCCTAACAACTTCCTAGCGGGCCAACTTCACCTCCACGCCCGGGATTGGGAAGAGCTTGTAGCTAGAGCCCCCTATGATGATGCATACGAGGTCCTTGATTGGTTTGCTTGGGGGGCCCTCTTTCCTGAACACAGTCTGATCCCTGTGTCGGATTATTGGAGCCCTGATATGAGCCTTCACAACATAGCAGTAAAGGAAACCAAGGCCCTAACGAACGCCATTCTAACTTTCCGCGAATCCCTGGTGAACGCCCGGGTTGATGCGTTCGTAGACAACCAATGTCTTGTGCAAGCTTGGAGAACACAAGCCGCCAGAGCTGGCCCTTTCTCCGATGCACTAAAAGAGCTCTATTCCACTGTCGCCGACCAAAACATTCACCTGGTAGTATCGTACATCTCCTCAGGAGAAAACCCTGCTGACGAACCATCAAGAAAATTATCCCCGGCAGATGGTAAATTGGCGCCACATCTGTGGGCTCTACTCCAGGAACACCCTCGCTTTGGCGGGCCATCCGGTCACTCTATCGACCTCATGGCGCTCGATTCAAACACTCAGGACGGGAAGGATGGAAAACCTCTGCCCCACTTCACTCCCTACCCGATGCCAGGTTCTTCGGGAGTAGATATCTTTGCACAAGACCTGAGCAGCCCAGAGTCCGACCCGTTGCTGCGAAACCTATATGTTTTCCCCCCTATTATCCTTATTGGACCTGTCATCCGACTCCTGCAAGAAAACAATTGCTCTTCCACCATCGTGATCCCAGACGTTCGTCCCAGGCGGTACTGGTGGCCGACTCTGAACCATGTAGCCCGGACCTATCTACGCCTCGCGTCGAGAGGACAGCTCGGCGCGATCCGCCCCCCTCTAAAGAAGGTTACCGCAGCGAATTCAATCTCCCGTGGGATTTATGGGCTTTCCGGCTTTAAGATCCCTGGTGAACTGTGTGTCATAGAAAAGCTAATTCTTCGAGGTACGCGAATTGTTATACCTAGCAAGTTGCGCCCACGAATCCTAGCGTTGGCACATGAAGGATACCTTGGTATCGTGGGCACGAAACAAAATCTGAGAACGAAGGTATGGTGGCCTGGAGTCGACAAAGCTGCAGAGCAACATTGCAAAGGATGTCATGGCTGCCAGCTAGTGGCACGACCAGACCCACCAGAACCACTGAGACCCACGAAACTTCCTGATGGACCTTGGCAGGATATTGCCTGCGACTTGCTAGGACCCCTACCATCAGGACACTCCCTTCTGGTGACAGTAGATTACCACAGTCGCTACTACGAAGAGCTTACCGCACAACACTACTGGGAAGAGCCCTGCAGAGATGTTATTCAACCGAAAAATGCGAGGAAAAATCCCAGACCTGAGCATGTGTATGACCAAGAAGTCTTCGACAGGGATGCCGAGCAAAAGGCGAAAACAAAATCCTATGCTGTTGCGCTGCGAGGAGCCCGCCCTTCTATGATTGCTGTGGGAGACCAAGTCCTAATGAAGCAGGACAAGCACAACAAGCTGACCACACCTTTCAACGCAGTACCGCACACTGTGACAAGTAAGAGTGGGAATAGCACAATAGTACAGAGCCCTAGCGGTGCACAGTACTCTAGAAACACCAGCCACATCAATAAATACACTCCAGACTTCCCAGAAAAGGAGAGGGAAGTGAATGTGACAGTAGAGGACAGCAGGATAGATGACCCCAAAGAACCACCAAAAGAAGCCCATCTGGACAGGACTGAACCTGAGCCAAGGACCGGCAGAGAACAAGAGCAAGGCCAAAACACTTTGATGATT

Transcript

Actinostola_16418

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00191	Annexin	Annexin	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001464	Family	Annexin	Interproscan
IPR018252	Conserved_site	Annexin repeat, conserved site	Interproscan
IPR018502	Repeat	Annexin repeat	Interproscan
IPR037104	Homologous_superfamily	Annexin superfamily	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005544	Molecular Function	calcium-dependent phospholipid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-