Detailed information of Actinostola_16346 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_16346POLYCYSTIN-1scaffold485_size3076141366732602+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00801PKDPKD domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF02010REJREJ domainFamilyInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000203Conserved_siteGPS motifInterproscan
IPR000601DomainPKD domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014010DomainREJ domainInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46730POLYCYSTIN-1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP