| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Actinostola_15240 | TRANSCRIPTION INTERMEDIARY FACTOR | scaffold3_size1929625 | 856041 | 888990 | + |
| CDS | |||||
| Actinostola_15240 | |||||
| Transcript |
| Actinostola_15240 |
| Protein |
| Actinostola_15240 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | MBD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01429 | MBD | Methyl-CpG binding domain | Domain | Interproscan |
| PF02791 | DDT | DDT domain | Family | Interproscan |
| PF15612 | WHIM1 | WSTF, HB1, Itc1p, MBD9 motif 1 | Motif | Interproscan |
| PF15613 | WSD | Williams-Beuren syndrome DDT (WSD), D-TOX E motif | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001739 | Domain | Methyl-CpG DNA binding | Interproscan |
| IPR016177 | Homologous_superfamily | DNA-binding domain superfamily | Interproscan |
| IPR018501 | Domain | DDT domain | Interproscan |
| IPR028941 | Domain | WHIM2 domain | Interproscan |
| IPR028942 | Domain | WHIM1 domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45915 | TRANSCRIPTION INTERMEDIARY FACTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000790 | Cellular Component | chromatin | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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