Detailed information of Actinostola_14537 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_14537DESMOGLEIN FAMILY MEMBERscaffold353_size382075242023340003+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050971FamilyCadherin domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24025DESMOGLEIN FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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