Gene detail

Detailed information of Actinostola_13643 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_13643	CREB-REGULATED TRANSCRIPTION COACTIVATOR	scaffold29_size1054737	835713	888823	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_13643

ATGGCGCACCCGAGAAAATTTGTAGAAAAAATAGCGATACACAACCAACGAATGGCCGAGGAAACTCGAGCCTTTGAGGAAATCATGAAAGAAGTGTCTGTTTTGGGGAGCTCCATAAAAGCTAATTCCAGTCAACATCAACAATATAGATCTCTTCCAAATGTGAACTTAGGCTTTGGACAGAACCACATTGATCTTCAGAAAGCGCTCATGAACCTCGATAATATGCAAAGACAAGGACGAGTCGAACACTTGCCGATGCGGGAACGAAGATTTACAGCTACCAGATCGACGCCTTTCCCCACCAAGCGAAACTTCGACCCTTCTCCGTACCATACAGCGCCACCATATCTAACACCGCCTCAAATGGACCAGGCACAGAACTGGAGAAGGGCCATCTCAGACTCGTCTCTCCACCAGACTGTGATGGGAGGATCTCATCAACTCAAAGAAATTGACATCAACAAGATGGGAGAGTTAAAGAGAGCTGCAAGTCCTCAGAGCAGACCTCGCTCATGTGAAGTGCCTGGCATAAAAATGTTCCCAACATCCGAACAAGCATCACCAGTGAGTACACCGCAGTTAGCAAACACTGGCTCACTTCCAGACTTAACAAATCTTCACATTCCATCACCTCTCCAAACACCGATTGATACTGAGGATAGTCAGATGAGTCATGCAGCATCGCCTCCTCACTACCCAACATCACCAAGACCGACACACATGAGAAGGCACACACATTCACCAGTATTGGATAAGCATCCTTTTCCTCCTCCAATGCCTTATATTGATCCAAATCTTTCACCTCTGGAGCTACGGTTACAGCAATTCCAGCCTTACCAACAATCGCCTTCAAATAGCTCCGATGTTCCCAATCACTTTGGATCACATAGTACGACAGTCGCATCTCCAACAATGTCACCTACGGCACCCACGTCCATGTCTCCTCTCTTTAAAAACTTCCCAACACAAATGACGAATGATTCGATGAAGCAGCAACATGCGATAAACAACTCACTGCAACAACAAATGCAACAGGATTCAATGGGGATGAGTTTTGCCTACGGTGGGGGGAGCCTGCCTCAGCGGTTGCATTTTCAGTCAGTGGCGTCCCAGCAACCAGGAATGCACTCTCCTAATAGCTTTGGTCAATTTTACACTCAAGCAGGAAGTCGGGTGCCTGATTTGATTGTGACGAGTGAGGATGAGGAATCACAGAGACTAGACTTCGCACGAGAACTCACTTCTGCAATGGTAAATGTTGGAGGTGGGAACCCTGCAGATTTCTATGGCAATGAAGACCCATTAAAGGTTGAGTTGGGTCAGCTAGACATGGAAAGTTTACAGATGTTGTCTGGACATGGGGATTCAGAAGTGGCTGACCAGGCAACCGAGGATCAATTTCGCTTGGATAGGATTTCAGGTTATAAAATTGCGGCACTAGCACATGGGCGGCAGTTTTGCCCCTCAGTCGAAGCTTCACCAAGACTATACTTTGTAGAAGGGTATGCGATAGATGCAGGAAAGTCATCCGTTTTTTTGGCTACCGTTGCAGGGTATGCAGGTATAAGTGTCACAGAAAATGCTCGTCCTGTACATCACAATACTGTCAAAGTGTGGTCTTCCAAGCACAACAGAACTGAATGTTTTGGACTGACTAGCCTCGTGTCCATGATGCTGCACAAAAGAGATTTCACATGGACACGAGTTGATGACTGCCAGTCCACCGAGCGAAATGTGTCCATCACAAACACCGGATCAATACAGTCGTATCTAGAAAGCGAAGATGACATAAAGAAATCGCTCAAGGAATGGAAAATTCCTTTCTCGGACCTTCAGTTTGGAGATGTTGTTGGAGCAAGTCCCAAAGGTCACGTCTACAAGGGTCGTTGGCATGGTGATATCATGATCCATACAGTGAAAAAGACTGCGAAATCTGACTTTGAAGAATTCTTGAAAGAGGTCTCACTCCTAAGCATGATCAGACACGAGAACGTTGTGCTGTTTATGGGTGCTTGCCTAGAGCCACCCAACCTGGCCTTCATCACCAGCATCCGCAAAGGTCTGTCTTTACACACCCACCTTCATGTAAGACACGACTTTTTCCCTCTTTCTACACGAATCAGCGTTGCTCGTCAAATCGCTCAAGGGATGAGCTATCTGCACGCAAAAGGCATCGTTCTTCCTCACTTTAATTCAATGAACGTCTTTCTGGAGTCGAAAGTGAAGTTATGTGTCACCGCGTACTCGGGTAGAACAACCGTTGAGAGACATGGCTACGTCAGTATACCACGTGGTCACCTGACGTATATTCCACCGGAAATGATGCGTACTCTCGTATGGTCTGATGACGAAGTTGTTTCCTCTGAAATCCACTCGATAGTAACAAATGTCTACGGATACGGGACGATTCTTTATGAGATCATGACAGGTAGATGGCCATTCTCGTTACATCATGTGGAATGTATTATATGGATGGTTGGCAAAGGAACCAAGCAATGTCTAAGACATACCAAATGTCCAGAGAACATCAAGGTACAAATATTATACACCTACGGTCGAACCTCCCGTAAGCGACCACCCAAAATGTCAAGCTTTGTGAGCTTATTGAGCCAGTGTTGGAATGAAGACATCATGGAGAGACCTGAATTTTCTAAAATCGTGCAATTCTTTCAGGAACAAAATTTCCCACCACAGGCAACCCATAAAAGAATCAACGGGAGTTTCTCAGAGCCTGAAAAGATGCATTTGATTGGAAGAACAGGAAGGTTATCGATTAGATGA

Transcript

Actinostola_13643

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF12884	TORC_N	Transducer of regulated CREB activity, N terminus	Family	Interproscan
PF12885	TORC_M	Transducer of regulated CREB activity middle domain	Family	Interproscan
PF12886	TORC_C	Transducer of regulated CREB activity, C terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR024783	Domain	Transducer of regulated CREB activity, N-terminal	Interproscan
IPR024784	Domain	Transducer of regulated CREB activity, middle domain	Interproscan
IPR024785	Domain	Transducer of regulated CREB activity, C-terminal	Interproscan
IPR024786	Family	CREB-regulated transcription coactivator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13589	CREB-REGULATED TRANSCRIPTION COACTIVATOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0008140	Molecular Function	cAMP response element binding protein binding	Interproscan
GO:0032793	Biological Process	positive regulation of CREB transcription factor activity	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0051289	Biological Process	protein homotetramerization	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-