Gene detail

Detailed information of Actinostola_12250 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_12250	COILED-COIL DOMAIN-CONTAINING PROTEIN 78	scaffold227_size477567	451149	473673	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_12250

ATGAAAGTTCTAATTAATGCATGTAATTCAATTTCTATTTTCTCACTAGCTGTCGGCTCTGTGCCAAGTCCTTTTGACTGTTATTTGGCCAATCGAGGGCTCAAAACGCTGCATCTACGAATGAGACAGCATGCTGCCAATGCATTTGCTGTGGCAAAGTTCTTAGAGAAAGATGAGAGGTGTGAAAAGGTTCTATACCCAGGATTAGAGGCTCATCCACAACATGAGCTGGCCAAACAGCAGATGACAGGGTTTGGTGGCATGGTGACATTCTACATCAAAGGTGGGCTTGAACAGGCCAAGGAATTTCTCAAGAAAGTTAAGGCAAGTACTATATACCTCGTGTTTACACTTGCTGAGAGTCTTGGTGGTTTTGAAAGTCTTTGTGAGCTACCGTCGATCATGACGCATGCCTCGGTGCCGCCAGATCAAAGGATCGTCCTAGGGATCTCTGACAACATGATCCGTCTGTCTGTCGGTCTCGAAGATACGCAGGATATAATCGATGATGTCGACCAAGCATTAGCAGCGGCGGTCATGAATGTCGAAGTTGTAGCACGGATTCGTCCTCCAAGCAGAGGGGAAATCACTTCCCTTAACGTTTCAGGCACTCGTATCGAAACAGCGAACGGAACTGGGCATATATTTGATGCCGTGTACAAGCCCCATGTCCTGACGTACGACATTTACAAAGATTCCTTCTCAACATATGTGGACTTTTTCGTCGCTGGTTACAATGTTTGTGTACTTGTATTCGGGGAGACAGACTCTGGAAAGTCGTACTCGTTGGCTGGGAGAAAGCTTGACTTGACGGAGGACCCTGTTGTGGGTGTTGATGTCAAAAATATCACCAAAAAACAAGTGTCTGATGCTGCAGAGTGTACCGCACTGTTCAGGCAGGCATTGGAATCCACGACGCATTCAAAGACAGATTATGGCCAAGCAGACACTAGATCAGCCATGCTCTTCATCCTTGATCTGATAAAGGTTCACAAGGATACTCCTGAACCATTTCATTCTCGTTTGATGGTCGTCAAGTTACCTGGTGCAGAGAAACTCGCAGAAGACCCCACCCAGCTAAGAATGAGAGAAGGCCCCACCCTAAACCGGTCTATCTTAGCATTTAGACAGGTAGTATCTTCACTGGCGGCATCTCCAATGGTAACAAGAGTCATCAATTATAATGATTCTAAGCTGACAATGCTGCTAAAAGATGCTCTTGGTGGGAATTGTAAGACCAAAGTCCTTGTTACTTTAAAGGCTACAGAGACTGCTACTTTGAGTACAGTATTGACAATGTCAGGGCAACTTGCACAGATACTGAACTATCCTATTGTAAATGATCACCTGGCACAGCATCAACTTATCCACTGGATAAGGATTTATCCAGTGGATAGTGCTATCCACCTTTTGTACAACCAGGGCCAGGTGTCAGTCATTTATCTGCAAGGTGGTCAGTCAGTTTATCTGCTAGGCAATCAGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTGAGTCAGTTTATCTGCAAGGCGAACTTAATAAGCCAGTACAGAGCCATCATATTCCATCTTCAAGATGACCTTAGACACAGTGGAAGAAACCCAGGGGATGCACGGGACAGTAAAGTACAAGAGATGAAAGATCAGTTGGCAAAAATAACCAATGAAAATGCCAAGTTACAAGAAGGTCGAGAACAACTGTATCGACGTATTATTGAACTAGAAGCCAAGTACACAGAAGCCACAACCTCGTGGAAGCAGCTTTCTTCTAAACTAGAACTGAGCGACGAGGAAAAACTACAGATTTATAAAAACCTGGTTGATCTGCAGCTTGAAAATAATAAGTTAATCGAGGAAGCGGCTGCCGATAAATACGAACTTACGAACAGGATTTTGTCATTAGAGAATCAAGTTAGCGAGTTAGATACTGTACTAGAGCGTGACAGACGTGCTGGCGAACAAGCCAACTTTGCTCTTGATGAGTTGCAGAGAGAACATAAAGAACTTGGTGATGAATACCTTGTATTAAAGACCAATCACATGCAGATATCCAATCAACATCAGCAAGAGGTAGTTTCCAAGAATGAGGAGCTTGGTTTAGAGCTGGTTCACCTTTCCAGCATCAAGGACAGGTTAAAAAAAGACAAGGAGTCAGTTGAGATTGAAACTATGCAGGAATATTACAGCCAATTACGCAAACTGGCCAGCAAGTTCTCTCGTAGCTCTCTACAAGAAAAGGTGTCACGATTATCGATCGTCGTTGTCATTGTCATTCCTATAATAATCACTATTCCTCCTCTATCTGCCTCCTCCTTCTCCACCTTCTCCTCCAATTCCTACTCCATCACCTCTCCCTCCTTCTTCTCTTCTTCCTCCAACTGCTCTTCCTCCTCCTCTCCCTCCTCCTCCTCTCCCTCCTCCTCCTCTCCCTCCTCCTCCTCTTCCTCCTCCTCCTCTCCCTCCTCCTCCTCTCCCTCCTCCTCCTCTCCCTCCTCCCCCTCTCCCTCCTCCTCCTCTTCTCCCTCATTTACATTTGACATGTTCTCTGTTTACCCATGGTTCTTTGCTATCTTAGTGACGTCGTTTGATTCGTTACAGAATGACATGTCAAAGAGTTTGGTTTCACTTCGTTCAGAGAACTTGCAACTTGAAAAGCAACTTTTGATGTCAAGTCATGCAAAAGAAGGAATGGCCGACGCCTTAAAGAACGAGTACCGCAAAGAGCTCTCAAAACTGGAAGATAACATACACGGACTCAAAATTAATGTCAAGCAGCTCCAAGCATCTCAAAGGGACAGTCAACGAAAGCTAGCTGGCCAATCGGCTGAGCTGATTATGTCACAAGCAGACAAAAGACGCCTGGAAGAACAGAATAACAAGATTGATCAGCAGTTGAAAGAAGTCAGTGTTGAATACAGCAACAGGCTGCAGCAGTATATACACGATATATCAGTCTACTGTGGCCAGATGTCAGGACAACAGGTCTCGTTGGAGTCTTTACATGCCTACATCGACGCCATGGTCAGAAAGGTTCGTGACGCACAAGAACACCGTGTAGTGACACTAGAAGAACGGGTGAAAGCCTTGAAGGACAGCCTTCGAGAAGTAACTAGCAAACATGGGAAACTGCTGTCTGCTTACAGCGTTCTTCGATATGACCTTGAAACAACCAAAGGATCCCACATGCAATATGATGGTGATTACCTGTATCAACCAACACAAGAAGAGTTGGACAATGCACAGACCCAAGAAATCAGGAAATTAACAACAAAAATGTATAAATATGAACAAGATATCGAAGACCTCAAGAAACAGTTATCTACTGCTACAGCAAAGCTGGTAAACTTGAAGGACGTTTCTCCAATTAAGACAGCAAGAACTGAAGACAAGCAAAGCGTTTTTGACAGTTCGTCTGAGGTAAACTGGAATCAACTCCGAAAACTCTTGCGAGAATTTACTTTAAACACGCAGCAAGATTTGGAGAGCGAGAGAGCATCTCTTATGACAAGATGTGTGATAGCAGAAGAGCAAGTCAGCGGTCTACAGGAATACATTGACACTCGACTTAGAAAATATCTAGACGAGATCGCGAGACTCAGGAAGAGATTAGGCGAAAGTGATCGAGTCAATAGCGCTGATGCTGCAATCAATAGCTATGGAAGACTTAACGATACACGATGGCGTAGATAA

Transcript

Actinostola_12250

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan
PF01053	Cys_Met_Meta_PP	Cys/Met metabolism PLP-dependent enzyme	Domain	Interproscan
PF14739	DUF4472	Domain of unknown function (DUF4472)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000277	Family	Cys/Met metabolism, pyridoxal phosphate-dependent enzyme	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR029329	Domain	Domain of unknown function DUF4472	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR039873	Family	Coiled-coil domain-containing protein 78	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22106	COILED-COIL DOMAIN-CONTAINING PROTEIN 78	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0019346	Biological Process	transsulfuration	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-