Gene detail

Detailed information of Actinostola_10449 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_10449	METABOTROPIC GLUTAMATE RECEPTOR	scaffold156_size547234	83717	92270	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_10449

GTATTCAGCAGATATGGCAAAGTAGTGAATAATTTATTCATCTCTGTCTGTCTGTTGTTACTATCTGCCAATCAATCTATCTTCTGTCTGTCATACAGAGTCACCATCCTAAAGGACAAAGTAACCAGAGAAAGCAAAGGTGTGGCCTTCATTCTCTTTCTGGACAGACAGACAGCTCAAAATGCTGTCACATCTATCAATCAAAAACAGATGTTTGGTCGTACAATAAAATGCTGCATAGCCAAAGACAATGGCCGAACAACAGAATTCATTAGAAGGAAAGAATACCCTGATAAATCGCGCTGTTATGAATGTGGGGAAAGTGGTCATCTCAGCTATGAATGTCCTAAAAATGTACTGGGAGAACGAGAACGACCTCCCAAGAAACTAAAGAAGAAGAAAAGAAAGTATCAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGTTGGACGAAGTCGGCGAGGGCGAAGACCCTTCTGAATGGAGCCTAGGAGCCGCCATTGAAGAGTGTGCAAGACTTGCAGATGCGAAAGATCCGAAGACAGAAACTGCCCAAAGAGTGCGACAAATCGGCGATGTCAACATCGGTGCGCTCACGTCTCTTCATGGCCGTAAGGGAGTTGATCAATGTGGACGGCTCGACGTCCCTGCTCTTGGCGTAGCAGAGGCGGTTGTGTTTGCTGTACAAGAAATAAACAAAGACCCATTGATTCTATCAGGTGTCGAACTAGGGTATGAGATCTTTGACTGCTGTCAAAGCCCTGTCCTTGGAGCAAGAAATGTTTACAATATCGCCGTAGCTAATCGAGATGCTTTCAGAACGCCACACAACAATAGCTCCCACCCTGTAGTTGCCATTGTCGGGGGTTTAGTCTCGGAAACCGCCCTGTCGGTCTCGACGCTGCTGCAAGCCGTAGGCCTACCCATCATCGGGTCCCTCGCCACATCAGAACAACTCAACTCCAAGTTTCATCGCAAATTTCTACGGACAATTCCCGCAGACGGTAATCAAGCAAAAGCAATCGCTGATATTATTGAGTATTTTGGTTGGAGGTATGTGGCAGCAATAGCAGAAGACGATTCATATGGTAGGAGTGGTGTACTAGCGCTCCAGAGAGAAGCGCACAATAGACAGTCATTCTGTGTTGGGATCACCGAGTTTGTACTTCACTCGCAGTTTGATCGAATTCCATCACTCGTCTACAAGCTGCATCAACGAGCGACAGTCAGAGTGATTGTACTGTGGGCACTACATTCTACAGGAAAAGCCGTTCTAGAAGAAGCCATCAAACAGAACGTCGAAGGCCGCACGTGGATTATGAGTGAGTCGCTGTCCATGCAACGAGCAGAGTATCTCGGGGCAAAGATCGTTTCCAATGGCAACCTCATCGGAGTTCTCCCAAGACGACGCACATCCGAGCCATTCAGGGCACACATTCAAAGCATCACCTCGTCATCATCCCAAGGGAACCCCTGGTGGGGGGAGCTTTGGCATACAGAATTTGGATGCTTACCTAAAGATTGCGGGAGTGACCTTAGGATCGCTGGTGATCTTCTGATGAAACTCACCAATGACTATGTACCGTTTGTCATCGATGCGGTCTATGCTATTGCGCGTGCGTTGGACGCTATTTTGCAATGCAAGGAACCACATGGCTTACTCGAGGACGGCCGATGTCCTTCAGGTCCTCTGTCCCGTGTCAACTCCAATGACTTGTATTTGTATCTGGGCAAAGTCAGCTTTCAAGGGCTTACCGGTAGAGTCGAGTTTGACGCCAATGGCGACCCTGTGGGTGCCCTCTTCGACATTGTTTACTTCAACATCAATTCAACGCGTGGAAACACGACCAAGATACCGACAAAGCTGACTATAGGCTCGTGGGAAAAGGGAGCCAAGCAGTCGCTACTGTTGGAGGCGAGAGATATATCTTGGAATGGAAAAAAACATCCTGGTCCATCGAAGTGCCGTGAGGAGTGTCGACCCGGTGAGCGCAAAGCAATAACGACGGACTGTTGTTGGGAATGTATCGAATGCGCAGTAGGCTGGGTTACCAAGACTTCGGGTCGAAGGAACTGTTCAAAGTGCCCCGGGACCCAGTTCTCCAACAGCGATCGCTCAGCGTGCGTGGATCTACCGCTGATCAACATTAAATGGAGTGACGTCAGTTCTATGTTATTGATCATTGTCAGTCTGTTTGGCGTGTTCTTGTGCATCGTGGTTTTTGTAATACTGATCAAGTACAGAAAGACACCCGTCGTGAAGGCAAGCAACCCTGAGATTAGTATTATTCTGTTGGTGGGTACGGCATCGTGTTTTATGTTGTCCTTCCTCTACATAGCAACACCAACCGATCTGATCTGTACAGCGTTACAGCCACTACGATACATCATCTATACAATCTGCTGCTCCATCCTTGGACTCAAGACGGTACGCATCGTACAAGCCTTCCAGATGAACCTTACTAGTGGACTTATGAAGAAGCTGGTTAAAAGTGCACCACGTCAACTGTCGTGCCTCGCCGTGTTAGTGTTCGTAGACCTGGTTCTAGCCGTCTGTTGGATCACAACCGACCCACCAAACTTAGACAAAACAGTCACCCAAGATGGCTACATCTTCTTGTCGTGCGAGAATTTCAAGTACACGAGCGGTCAAGTAATGATGATTAGTATGTTGTCTTACTTGATAGCACTCGCCTTATTGTCCACATACTACGCCTTCAGAGCAAGGAAACTCCCAGGAAACTTCAACGAAGCCAAGTACATCGCGTTCTCGTTGTATATCATTCTACTGTCCTGGATCGCTTATTTCCCGGTAGGCTATGCGCTCCATGGTTGGTACGTTGCCGTGGTTTCATGTGGGACATCACTGGTCAGCGGGTACGGTGTGCTAGGCTGCATATTCTTCCCCAAGCTCTACATTATTTTCCTAAATCCGGCAAAGAACACAAAAGATGCCGTCAGAGCTGAACTTCACGTGTTTTCCAGAATAGGAACGTTTAGCAAGGTTGAGTTGCCCGAACAAGAGTCCTCGAACAAGTCCAATAGTTTCGGCAATAGTCCAGTGACTTGA

Transcript

Actinostola_10449

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00003	7tm_3	7 transmembrane sweet-taste receptor of 3 GCPR	Domain	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF01094	ANF_receptor	Receptor family ligand binding region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000337	Family	GPCR, family 3	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR001828	Domain	Receptor, ligand binding region	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR017978	Domain	GPCR family 3, C-terminal	Interproscan
IPR017979	Conserved_site	GPCR, family 3, conserved site	Interproscan
IPR028082	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR038550	Homologous_superfamily	GPCR, family 3, nine cysteines domain superfamily	Interproscan
IPR050726	Family	Metabotropic Glutamate Receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24060	METABOTROPIC GLUTAMATE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001640	Molecular Function	adenylate cyclase inhibiting G protein-coupled glutamate receptor activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0007216	Biological Process	G protein-coupled glutamate receptor signaling pathway	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0051966	Biological Process	regulation of synaptic transmission, glutamatergic	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-