Gene detail

Detailed information of Actinostola_09314 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_09314	ADHESION G-PROTEIN COUPLED RECEPTOR	scaffold124_size590780	472099	496915	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_09314

ATGGCCGAGAATGTGCAAACTACACCATGCTCAATTCATCAGACCGTTCTGCAGGTTATCTGGGCAATCACTTTTGGAAATGTGACGTCCATCTGCCAAAAGAATTGTTTTTACAACCTACGACTACAAGTGGCCATCGACAAAGTTTACTTCACGAAACGAGAATACTACTATTTCCGCTGTGATAACTCAAATGAAGTAATCAAATTACAGCACAGGTGTAATAACGTTTCTGAATGTACTGACGGCTCTGATGAAAAGAACTGCCAAAATATGTACTTTAAATACGAGCAAACATGTGGAAACAAATCGTGCAACGTGTCAAAGTTTGTACTAGAGAAAGTAGAAGAAGGTATTGAGTTTAGACCACATATTGATCCAATCAAATGGAGCGGTGATACATGGACTTACAAAAACTGCACGTTCACTTTCAATAAAGCAATCCCTCCAAAAAGCTGTCCACATATGCCTAGAGCCCAATGTTATGTCTACAATGGGGGAATCTGCTGTGCCAAGAAATGCAATGCTGTTACTTGCAAAGACGAGATGGGAAACAAGTACTTCGAAGGTGCCACATGGAAACCTAATGCATGTACTCAATGCAAGTGTGATGGAGGCGTCTTGCAATGTTACAGAACTGTTACTCAACTCAGACACATGCAATCTGCACATTTGGTGTACAACACGACATGTAGACAGCCTGACTGTAATGTGTGGAAATTCACCCACGAGAACTATGAACAATGTGAAGTTTGTAAGTGGGAAGATAAATACTACGCAAAGAATTCGAAGTGGACGATTGGAGGGATTCCGTTTCACTGCTGTACAAGGCACCACAAGGCTGGTTGCTATATTGAGTATAATATGATAGAGTGCACAGGCTCCTACCCTGGTAGGTATCTTCACAGAGCAATCAAAAACACATCGATTTTCTCAAGTTCTCGTCACTTTTTGTGTCAAAGTGGCGACCAAGTAATCCAAAGAGAATTAATATGCAATGGAGGTAAAGACTGCTATGATGGATCGGACGAACTTCTCTGCAAGACATATCGATGTCCAACGCTTATGAGGTTTAACAAGACTTGGAAAAATGGAGTTCTCGGCACAGTGTTGAACTTGAATTGTTCTGATGTTAACTCAAACTGGACAGGTTTATACCATGCAATTTGCATTAAAATAGCCCTAACAGCATGGACCGAAACATGTCTTTGTGAAAATAAAACTCTGGTAGAACAGATGGATAGAAAAACTATAATACTGATTGTGCAAGATCTCTTCATCATCAAGCAGAAAACCTCGAAATTCTCATGTAAACCTATAGGCATATTTATGGTGTCAGAACTCTTTGGTAAAGTTAAGTCATTTCTGAGGTTTGCACCTTTGAATTCCCAAAGCCATGACCTCCTAAACATGCGTCTTACTAAAAGACTAAATCTAAATCAACAATGTCTGATTATGACTCTTTCTCGATTTTATCCCCAAAGATTAAAAAAATCCAAGAAAACATTTATCCACAAGAGTCTGATGTTGTCTCTTTGTATGGCCAACGTGGTTTATATGGTGGATGTGGTGTTTACTGAAAGGAACAACTACCCGGCTGTTTGCGCGGGTTTGGCAGTTGTTCAGCACTACTTCCACACAGCGGTCTTCACATGGATGTTAGCAGAAGCTTTCTATCTCTACAGTAAGGTGATCCAAGTGTTCGCTAATTATCATCTGGTCATTTACATCATGACTGGATGGGGTATTCCTGGCGTTCTGGTTACCTTGACAGCTGCTGCCAAATGGTCTGTTTATGACATGAGACTGTTGCGAAAAGATACCTGTTTTGTGGTCCTATCAAGAAAACCAGAGTACCCGGAGAAAAACCCTCGAAGCAAGGCAGAGAACGAACTGACAAACTCAACTCACATGAAGCGCCCGGTCCGTGAATTGAACCAGGCACCTCAGCGCTGTTGGCTTAATGATGGATACTGGATATACAATGGTCCTATACTGGCGTTTCTCTTGATCAATCTGGTTCTGTTCATTTTGCTACTTCGAGTTGCTTTTGGGAAAATTGCCTCAAGATATCAACAACAGAAGGTGAAAAAGATAAGGAAAGGACTCAAATGTATCGCCGCGCTTCTGCCCCTACTTGGTGTCTCATGGCTGTTGGGTTTCACTGTCAACTTGCACTGGGTCCTTGCGTACATCTTTATCATCATCAACTCATCACAGGTGAAAAGCGCTTTGAACTTAAAGACGAAATCAGACCGCATCAAAGTCACACCAAAC

Transcript

Actinostola_09314

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF00057	Ldl_recept_a	Low-density lipoprotein receptor domain class A	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000832	Family	GPCR, family 2, secretin-like	Interproscan
IPR002172	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR017981	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR036055	Homologous_superfamily	LDL receptor-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007166	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-