Gene detail

Detailed information of Actinostola_08898 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_08898	HISTONE ACETYLTRANSFERASE	scaffold116_size611073	480785	496888	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_08898

ATGGCAAGAGGCAGGCATAGCGACAAGGAAAAGGAAAAAGAAAAATCCAGCGAGCCTATCCTGGATCCGAAGTACGTATTATGGATACTTGCAGCCATACAGAAAGTTAAAGGACAAAAACAGCGTCCGAGTGAAGATAGAATATCTCACGTTTTAGAAACAGGCTATGGTCTTAGTGAGTCAGTGATCGAAGAACAATTAGAACTGTGTGTTAGACATGGAAAGGTCTTAAAAGTGACATTCAAAGGCCTGTCCTCTTACAAAAACCCTCTGTTGGTCCCACACAATATTCGAGGTACTATTGAGAGACCAGTGGATTTTCAGGCCTACACCGGCGAGGCTTTAGAGAATGGTGGTGAAGATGGCTGTACCATGCAAGCTGTTGAGAGGTACGTTCAGGAGAATTATGGGGATGTGATAGGAGCAAGGATGGACGTACATGCTCATGTGAAAAGCGTACTGAAGAAAGGATTAGCAAATGGGATCTATTTGAAGGAAGGAAGGAATTACAGATTACCATCTTTGATAAAGCCAAAGAAGAAGGCCAATCCCAGTCCTGTTTGTGGATTTTGTCTTGGTACAGCTGAGAAGAACAGGAAAGGAGAACCAGAGGAGCTCATATCATGTTCAGATTGTGGGAACAGTGGTCACCCATCATGTCTGAAATACTCTCCTGATCTAACAATACGAGTAAGGTCTGAGGTCTGGCAGTGCATTGAATGTAAAACCTGCTCAATGTGTAAAGAGGCTGGGGAAGCTGATAATCTATTGTTTTGTGATGCCTGTGACAAAGGTTTCCACATGGAATGTTTAGATCCTCCAATGACTGAGATGCCTAATGGAAGCTGGGTTTGTTTTCTTTGTAAAACCAAAACACCTGGTCGCAAAAAGAAAGGTCACGTGGATACGCCAATCGTCACTCCACCAAGAAGGAAAATACAACCTCAGTCCCCTGAACATTCTACTGCAGGGCTTTGTCCCACACCTGGATGTGATAGTACAGGACATATAACAGGACGATTTGCTACTCACAGAAGAATAGAGAGACTGACCAGGCAGCACTTCAAGTACACTAAAATATGCAGCACTAGATTTCATGTTGGAGCTTGCCCAATGGCTGCTGAAACCAAAAAGACTGAAAAAGACAAAACTGACAGTGTGTTAGAAACACCCAAAGCTGCACCCACCCCACCCCCCACACCTGCTACAGAAGAAGTGGTCAAGAAAAGACCCGGACGGCCATCTAATGTGCAAAAAGAAAAAGAGAAAACCCATACACCACACCCACCTACGCCGTCACCTAGGAAACACTCCCATCTACCACCTGGAGTCTCTGAAGCAGATCTGGCATTGTTCAGAAGAGCACAAGAGAAATCTACTGGCAGCATGACAATGAACCCTATACTCTCCCCATCATCCAACTCTAGATCACCGTCTAAGATACAGTTTGGTCGGTATGAGATCACTACATGGTATTCTTCACCATATCCACAAGAATACGCCAGGTTAACCAAGTTATTCTTGTGTGAATTCTGTCTAAAATACATGAAGAGTGCAAGTATTGTCCAAAGACACATGTCAAAATGCAGCTGGTTTCACCCACCAGCTAATGAGATCTACCGTAATGATGATATATCAGTATTTGAAGTTGATGGCGCTGTTAACAAGATCTACTGCCAAAACCTGTGTCTGTTAGCAAAACTGTTTTTGGATCACAAGACGCTGTATTACGACGTAGAGCCGTTCTTGTTTTATGCCCTGACTAAGAACGACAAGAAGGGGTGTCATCTAGTGGGGTACTTCTCTAAGGAAAAGTCTTGCCAACAAAAGTACAACGTTTCCTGCATCATGACATTACCTCCCTATCAAAGACAAGGATATGGACGACTACTTATCGATTTTAGTTACTTGTTGTCTAGGAAGGAATCCCAGCCAGGGTCCCCTGAGAAGCCCTTGTCCGACTTAGGATTGATTAGTTATCGAAGCTACTGGAAGAGTGTCTTGTTAGAGTACATGTACACCAACAAAGAAAACCACGTGACCATACGAGGTATCAGTCAGTCTACTGGTATGGACCCACACGATATCGCTGCTACTCTACAGCTACTCAGCATGGTACAGAAAAGAGAGGGGAAGTTCGTGATCTACACAAACCAATGTATGATAGACAAACACATGGACAAAGTGCGTAGTCAAAATCGTACCGCCCTGGACGAAGACTGTCTACGGTGGACCCCTTTGGTTCACACTAACCTAGCCCTGTTAGATGAAACAGATAAGGTTGTGAATGGTTTAGATGGGTTGGGTCGTAGGAACCGACCAAGTGTTACTGAACACGATGTTGATATCGTCACTCAACATGTAGACAATGATGAAAAGCCTCGGGAAAACGGTGTTGTCGTGAACGGAGACATCCACATGGCCGGCGACGAACACCTCGAGCAAGAAGAAGCGGAGGAGGATGAACAAATCATCAGACCAAGAAAGCGAAAGCGTAGTGTGGCTCTCTCAGACGCCGGCTCAGAAAACTCGGCTACAGAAGCCGCAGCAGAAGACGAAGAAGATGGTGACGAGGAAGATGTTGACAAACCCGAGCAGGAGGACGATGACCACGAGAAACAACCCGAAGAAGAAAAAGAACCCGATGAAGAAAAAGTACCCGAAGAAACAGAGGCGAAAAAGCCCCGAACATCTAACGAAGGATCATCGAGCGAAGGCGATAGTGATTCCGACGAAGATTCGGAATCCGATGATGACGATTCTTCATCGTCGTCGTCGTCATCATCGTCGTCTTCATCTTCGGAGGAAAGCGACAACGAAGGAGATAAAACGAATAACCCCGCGAAAAAAACTCCCTCGAGTGAAAATCCACTGAATCGTCAAAACGAGTCATCGTCTTTGAATAATCCAGGATTAAATTACAATTCAGGGGGGTTCCAGCCTCACAGTGTCTCACAGCCTTCTGGGGACAGCCTGGATTTCGCCACCTCGTACATGATGGACTCGAGCTTTACCAATCTTTCGTCTCTGAATTCTGATTTAAATGCGATGGACTTTCCCGATACCGACAGCAGCGCGCTTATCAAAGAGTTATCTGAAGAAGTATTTTCTATCGGTGCGCCATGTGGGAACCAGAGCCCTAGTATGAGTGGTCAGCGGATGTCTGACGAAGAGGATGCGTAG

Transcript

Actinostola_08898

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-C2HC
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00628	PHD	PHD-finger	Domain	Interproscan
PF01530	zf-C2HC	Zinc finger, C2HC type	Family	Interproscan
PF01853	MOZ_SAS	MOZ/SAS family	Family	Interproscan
PF17772	zf-MYST	MYST family zinc finger domain	Domain	Interproscan
PF21524	SAMD1_WH	SAM domain-containing protein 1, WH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001965	Domain	Zinc finger, PHD-type	Interproscan
IPR002515	Repeat	Zinc finger, C2H2C-type	Interproscan
IPR002717	Domain	Histone acetyltransferase domain, MYST-type	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR016181	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR036060	Homologous_superfamily	Zinc finger, C2H2C-type superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR040706	Domain	MYST, zinc finger domain	Interproscan
IPR048589	Domain	SAM domain-containing protein 1-like, WH domain	Interproscan
IPR050603	Family	MYST family histone acetyltransferases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10615	HISTONE ACETYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000790	Cellular Component	chromatin	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003712	Molecular Function	transcription coregulator activity	Interproscan
GO:0004402	Molecular Function	histone acetyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0045892	Biological Process	negative regulation of DNA-templated transcription	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0070776	Cellular Component	MOZ/MORF histone acetyltransferase complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-