Gene detail

Detailed information of Actinostola_08856 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_08856	TYROSINE-PROTEIN KINASE	scaffold1154_size150224	50306	71087	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_08856

ATGTACAGTATAGTGCCTCCCCCAGATGATACTCCCCTCCAGGATGAGGAGTGGTTTCATGGCAAAATATCACGCGATGAATGTAAAAAGAGGCTAAAAGATGATGGTGAGTACTTGGTACGAGAGAGTGCTACCAAGAATGGAGAATACGTGCTTTCAGCTAAAGACAAGGGAGCATTACGACATTTTATTATTCAAAAAACAGAAGAGGGAACTGTTCGGTTCGAAGACAATGCCTTTCCAACAGTTCGTGAGCTGCTAAACTACCACATTCTACACAAAGCTCCAGTCACAAAGAAGTCTGGTGCTATGGTAACCACCCCAGTCCCTCGGCCAGACCTCAAGCCACGGACAGACAAATGGAGCCTGAGTCATAGTAGAATTCAAATCTTAACAAAATTGGGCCATGGACATTTCGGCGACGTCATGAAGGGAATGCTCAAGCCAGAAAACATTCCAGTAGCGGTAAAGGCTTGTAAAGAAAACGTGTCTGAACTTGTCAAACAAAAGTTTTTGTCTGAAGCGGCGATCTTGAAACAGTATGACCATCCAAACATTGTGAAGCTTATTGGTATTTGCTCTGATAGAGAACCAGTGTACATTGTGATGGAACTAATGCCTGGTGGTGATTTCCTGGTGTTTCTTCGTCAGAGCAACGGCCAACTAAACATTTCACAGCTGGTAAAGTTTAGTATTGACGCTGCGTCAGGGATGGAATACTTGGCCAGTAAAAACTGTATCCACAGAGACTTGGCAGCTAGAAACTGTCTTATTGGCGACGACGATGTGCTCAAAATATCAGACTTTGGAATGTCAAGAGAAGTAGAAGAGTTCTACGAGGCGACCAACATGAGAGAGATTCCTGTAAAGTGGACAGCTCCTGAAGCTTTGAATTATGCTCAATACACAACACTTAGTGATATTTGGAGTTTTGGAATATTACTGTGGGAAACGTTCTCTTTTGGTAATACTCCTTATCCCGGCTTGACAAACAAGGTGAAGAAGCAGAACGCCACTGATTTCGAGCCAGGAACTTTGACGTCTTTTCAAAGGAGCTTAGACCGCCATTTACGACAAAAGAGTAAGCCATACAGCATCCTAAGTGACCGTCAGTTTTCAAAATCACGGGAAACTCTCGAGTGCAAGAGAAGACAACTTCGTCTTGCTGGTAAAGGTCGTCGACCCAATAAAGCTCTTGGGCTTAACAGTGACGAGATGGAGAAGCTTTGGCTTGAAAAACAGCTCGGAGACCACAGTCCTGACGCTCTCATCCGCACGATTTGGCTCAACAACACAATGCATTTTGGATGGAGAGCACAAGATGAACATAGAAAAGTTCTCCTTGGAGATTTGGAAATCCAGAAGGAGCAAGGCGGAGATGAAAAGGAGTATGTAATCTGGCATACAGAACGGGGTTCAAAGACAAGAACCGGTGGTAAAGAGTTTGGACCCGAGCGATACTACAATCCACGAATGTACGCGACCGGAAACGACAGGTGTCCAGTGAGGATTTTCCGAGCCTATTTAGAGCATCGGCCGGCAGAAATGAGGAGTCCAGATTCTCCATTATACCTTGCAACGGTAAAGAATGCGAAGACTAACACATGGTTCAAACGCCAGCCACTGGGTGTACATTCCCTTGGATCCTTCATGAAACAAATGACAGCAAACGCTGATATTCCTGGCAAGCACACGAACCACTCCGCTCGAAGGACAATGATCACAACACTCCGCCACGAAAATATCAATCCGCTTGATATCAGTCAGCTCTCAGGTCATAAAAACTTGAAATCCATCGACAGCTACTCCAGTGTCTCAGAAGAACAGCAGAAACACATGTCCCTTGCAATCAGCAGGCTGAGCAGCAGTGGCCCACGAACAGCTTTGTCCACTGACACACGCGACAAGGTAGAGCAGGGTTATCGTATGCCACCGCCATCTGGTACTCCTCCTTCCATTTACTCGATCATGAAGAACTGCTGGACCATTGAACCAGAACGAAGGCCGACGTTCGATGAAACACTTCGTCGTCTTAGCCAGATTCAAGCACAATTATAA

Transcript

Actinostola_08856

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017	SH2	SH2 domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF12012	DUF3504	Domain of unknown function (DUF3504)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR000980	Domain	SH2 domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR021893	Domain	Domain of unknown function DUF3504	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR050198	Family	Non-receptor tyrosine kinases involved in cell signaling	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24418	TYROSINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-