Gene detail

Detailed information of Actinostola_07951 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_07951	SENTRIN/SUMO-SPECIFIC PROTEASE	scaffold974_size175753	97432	99716	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_07951

ATGGAGAATTTATTAAACTACCTTCATGTGAACACTTCCCTGGAGGAAGAAGATCTTGGATATTGTTTCAAAGGGGACTTCAATTTCAGCAGCCACGAGAAGAAAGAATTGTTGTGTCTCTTCAGTTCAGCTTTTCTCGCTGCTCATAAGAAACTTAGCAAGTATGTTGTGGATGGGGCACAGCCAGCTTCAAAGTTTCTAGATCAGATTCAAGTCCTAGATCCGAGAAATCTTATTGATGTGGATCTCAACTTTGATTCCATAGATAGCATCCCTGGATTTGAAGAAGTTTCAAGGAATGAGTGGGAACTTTATGTCAACATCCTGGGTCCTTCGGCTGTTAAGAACAGCACGGATGGAAAGGTGGACCTGAAGTTGTTTTGGAAATCAAAGGCAAGCAATCTACCTGAGCTCTACAATTTGGCATCATGCTATTGTACAACTACCATCGGCTCTTACGATGTAGAACGATCGTTTTCTGCCTACAAAGAAATTCTTGGTGAGAAACGAAGATCTCTAGATGAAAGCTCAATTAAAGCATTCCATTTCCTAAATTGGAATCTTCGAGTGAAGTCTTCGATTCAGCAAGAAAGGGAACAGCAGAGCAAACCAACTACCACACGTCCTGAAACGACAAACATGGCTGACAAAGTCACTCCAAAAGAGAAGCCAGTGCCAGTGCCAAGAGACACTCCAAAAGAGAAGCCAGTGCCAGGAGACACTCCAAAAGAGAAGCCAGTGCCAAGAGACACTCCAAAAGAGAAGCCAGTGCCAAGAGACACTCCAAAAGAGAAGCCAGTGCCAAGAGACACTCCAAAAGAGAAGCCAGTGCCAAGAGACACTCCAAAAGAGAAGCCAGTGCCAAGAGACACTCCAAAAGAGAAGCCAGTGCCAAGAGACACTCCAAAAGAGAAGCCAGTGCCAAGAGACACTCCAAAAGAGTTTCCAAGATTGTTCAAGGTTGCTCAAGAAAGACGCCAGCAACCTACACCTAAGCCTTATTTAAGTACAGAGAAAGTACGAAAAAGAACCAAAAGCGATGCCGCAGATTCCAATGAAAGAAGTACAGAGATTGGCAGTGATCAGTCCACGGCTGATAACACTCAGCATTCACCCAGGGTGTTACCAGCCACAGACGTGCATTATGGACTGCTCAAGAATACAGCCACCAGATTCAACGCACAAACAACTTGTGTTTTCCCAGAGCAGAAAGAACCCCTCCTGAATTGTTTGCTCGATGGTTCAGTTAGGTCCAAAGGCAGCAGTGTGCTTGATGAAAAAGATCTTCAAGGTCTTCATGGTTGCAAACCACGCGACGAAGATAAATACCTGACTAACTTTGTCATTGAGGCCTACTTCGATATCATTACAAGCACAGGTTCTTCCAAAGGTGTGCAAGCAGAAAGTCTGGGGTGGGAGGCATTCGAGAAGGGGCCTGCAGGCAGGATGTCAACTCAAGATCTGCTGAAGGGGAAAGCCCCTCTGATGGAGCAAGACGTTGTTCTGGTTCCATGTAACCCTGGCCAAAGCAAGCATTGGTTCCTTCTTGTTGTTCTTCCAAAAGAAAAAGAAATTCTAGTTTTGGACAGCTTAGCAGGGTCATTTACAAAGCCATCAGCAGAGAATGCCATCCAAAAGATGTGGAAGTTGTTAGAGGACGTTGACAGCAGCCTTGACAAAAAGCAGTGGCGCTTTTACACAAACACTCCGAAGGATATCCCACAACAGCTAAACAGCTTCGACTGTGGTTTGTTTATATGCTTGTATGCCAGATGCTTACTGCAATCTCCAGTTCCATACAGCGATAGCCATAACTTCAGGCGTCACATGATCTTGGAGTTGCATGAGAAAGAGCTGCACAGTTTTACTCGCCCTTTTGTTCAACAGGATAGATACTACGCTGTAGAATATCAGAAGACGTACTACTTTGGCCGAGTCCTAGGAAGTTATGATGGTGCAGGTTTCGTCGATTTCAAATTCCTGCACTCTACAGTTTGCAGTGGAGCAAAAGTGTTCGCCTGGCCAAGACGTGATGACATTGATAGATGTCACAGTTCGTGCGTGTTTTATGGCCCTGTTGCTGTTGTGGGTGTTGGCCCTTTTACTCTTCCACAATTGAGTGAAGTGGAACAAGTGTACCAGTGGTTAAAGAAAAGCAGAAAGGGTCCTTAA

Transcript

Actinostola_07951

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	DUB\|ULP\|ULP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02902	Peptidase_C48	Ulp1 protease family, C-terminal catalytic domain	Domain	Interproscan
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003653	Domain	Ulp1 protease family, C-terminal catalytic domain	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12606	SENTRIN/SUMO-SPECIFIC PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0016926	Biological Process	protein desumoylation	Interproscan
GO:0016929	Molecular Function	deSUMOylase activity	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-