Gene detail

Detailed information of Actinostola_06545 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_06545	FIBROUS SHEATH CABYR-BINDING PROTEIN	scaffold69_size775606	441811	466276	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_06545

ATGTCACACGGAAACGATGAGAAACCATTTGTTCCCAAAGGTTTCTCTACTTCTGCTTTACAAATTGGACATTCGATAAACTTGCTGCTCAATTCTTTCTGCTTCAATTGCAACGTGTTCATGTGCGAGGAGTGCTTGAGCGCACATCATGTCATTACGAGGAACAGTGGCCATAGGACCGTACCGTTAGGGAGGCTCAAGCTCAAAGATTATGAAGACGTCTTGCGAAGATCAACGTTTTGCGCCCATAAGTTTAACGAGAGAGGAATCGTGGAGTATTTTTGCTACAACTGTGATGCATGTGTTTGTCACGTTTGTAATGTTGCAATTCAACACAAACATCGAATTATCGACATCGACGTGGCTGCCAACGAGCAGAAGATGAAACTGCGGGAGGTCAACGCCAGACTTAAGACCAAACTTCAATCAGTGGAACATGGTATAAGCAATATTGAATTCAGGAGCGTCGAGGTTCAAGAGCAGATTGACTACACCAAGAACGACATTCGCTCCAAAATTGCCAACATGATTGACATTCTAAAGAAACACCAGGAAGACATGTTACAAGAGGTCGAAAGGATTCGAAAAGACAAACAAGAAAATCTGACCTTCCAACTAAGAATGTACGAAACAATGCGCAAACAAACAAAAGGTTCCATTCAGTTTACAGAAGAGCTTATTCACAGGAACTTGAGTGAGGAGATATTGACCATCAAGAATTATGTATTTGAACGCGCAAGAGCTATCGATGCAACTTACGTGGGGACAAACCCTGCTGAAAATGAGCGTGTTGGCTACGTGGCTAATACTAAAGTCTTTGATGCCATCCAACAAGAGGCTCTTGGTCACATCAGCACAAGCCTTACCGAACCTGCTGTTTCTAATGCTGAAGGCAATGGTATATCAGACGTCTCTGCAGGGGAAGAGGTGTATTTCATGGTGACGACACGCAATGCGCAAGGTGATACCTATTACAGCGAAATAGATCATGTTGTAGTTGGTGTGAAATCCGATATGTGGGGAGATATCGATGCGTCAGTTAAAAATTACCAGGACGGACGTTATGAAGTAAGTTACATTCCACGTGTTCCTGGAATCCACAAAATCCAGGTGGAAGTCAGTGGAGAACACATCGAAGGAAGCCCATTCGTAGTCCATGTCAAACAACCTGTATTGACTCCTGTCAAGTCATTTGGATCCCATGGTAAAAACACTGGCAACTTTCTACAACCGCACGGTGTTGCGGGAACTGAAGATGGGAAGTTCATGCATCCCATGTCAATTGCATTTGATAAGTCAGAGCACTACATCTTTGCAACTGACAGTGACAACAACAGAATTCAAGTATTTGATATCAAATCAGGAAGGTTTGTGAGAAAGTTTGGGACAGAAGGAAATGGTCCAGGCCAGTTCAATGGGCCATGCGGTGTTTCTGTAGATGGAACTGATCGTGTGATTGTAACTGACTGGAACAACAACAGGATACAAGTGTTCAATAATGAAGGCAAGTTTTTATTCAAGTTTGGAGACAAGGGTAGTGAGAGGCTGGTCCATCCAAGGTGTGCAGTCTACCATGAATCTGACAACTCTTTTATTGTTTCTGACACTGGTAACAATATTCTCAAAGTATTTGATCAAGATGGAAAGTTCTCCCATGTGATAGGAAAACCAGGGAGAAAGCGTGTTCGCTTCGATTCAAAGTTTCTCGACCTTGACCTTGTTGCTGCCTTAACGGTAGACACTGAGGGAGACGCGGAAGATGGAATTGTCAAAGAAGCCTCGGTAGATGCCTCAATACAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTACCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCAGTCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTGTTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCCAGTCACTTTACAATATGCTCCGAGGGTTTACAATATGCTCCGAGGGTTTACAATATGCTCCGAGGGTTTATTGGTGTGGGCTACCTGTGGCTGCGCAGAACAACATGCGCAGTAGTCCCTAG

Transcript

Actinostola_06545

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00630	Filamin	Filamin/ABP280 repeat	Domain	Interproscan
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan
PF01436	NHL	NHL repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR001258	Repeat	NHL repeat	Interproscan
IPR001298	Repeat	Filamin/ABP280 repeat	Interproscan
IPR003649	Domain	B-box, C-terminal	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR017868	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR043375	Family	Fibrous sheath CABYR-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36135	FIBROUS SHEATH CABYR-BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0033234	Biological Process	negative regulation of protein sumoylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-