Gene detail

Detailed information of Actinostola_05957 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_05957	CYTOKINE RECEPTOR	scaffold5_size1483770	1314629	1352303	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_05957

ATGAACAATGATATTTTAGAATGTAAGAGGAAAGCGCTCGCTATGATTTCATCAGAATATCCACCGCTTGACGACAATGGAAAGAAAAAGGGCTACATGAAAGTCTTGAAGGAGCTCTGGGATGACAAAGGATATATTAATCTTGGATTGAAAAGCCAAAATCTACGTGACCACGCGGCAAGACTTGAGAAAGTGCTGGGATATAATTTGGAAAGCGGCAAAGAACTTGAGTCTGCAGAAGGAACAACACAAGGTGACCCACTTGCTATGGGTCTCTATGCTCTCAGCCTTCAACCACTGATTACATACTTACAGTCCATTACCAAAGCAAAGCAATGCTGGTTTGCAGATGATGCGAGTGGAGCTGGATCTATAGAGGAAATTAAGAAATGGTGGAATGCATTAAACGTGACTGGACCAGATTTGGGATATTTTCCCAATGGTAAGAAATGTTGGCTTATTGTTAAACCGGAAAAAGAAGAGAACGCAAGAGATGCCTTCAAAGAAACGGCCATCAACGTTACCACACAAGGACAGACACATCTGGGAGCAGTAGTGGGTTCAAGATCATATCTAGACGAGTATGTTAGCAAAAAGATCTACCGCATGCACGAGAACGAGAAGAAGCGTATGTACTCGAAAAGAGTGATGGAAATTGAACAAGGAACATTCACACCATTAGTCTTTACTACAACTGGAGGGATGGGAAACGAATGTTTGAGATACCACAGTAGACTTGCTGAGCTGATTGCTATAAAGAAAGTCCCCTTATCATCACCGCCGTCTTTTGCTGTGATTTCCACCGAAGCGCTTCGTGTTGAATTCGAATGGCAACACATTCCACGTGATAGCAATCATATTGACAGAGTTTCTGGTTATGCTATATACCGCATCAAGTGTATAAATCTAGGTATTATGGCACCCTACGAGGTACCAGTGCCGAATGGGAATACACTGTCTGAGAACGTCACCTCACTGTTACCATATACCTGTTACTTGTTCAGAATAGCCGGTTATAACACAGCGGGTTTAGGGAAACTCTCTGACTGGATCAAAGCCACCACTAATGAATCAGCACCGACTGCCGCACCTCGAAATGTGACTGCTCAAAACACAAGCTCCACAGCTATCGATATCCAATGGGACGAAGTTGAGCCAGCACATCACCATGGCAACCGGTGTGGCAGTAATACTACTGATCATGTCGACATCTACCAACAACCTTCCAATATGTCAGCGGTCATCGGTTCTAGAAAACCTTACACGTGCTACCAAGTTCGTGTTTGTGGTAGTACAGTAATTGGACCAGGAGTTTACAGTGACTGGCTCAATGCAACCACTCTACAAGACATCTATGTGTTTGGTAGTACAGTAATTGGACCAGGAGTTTACAGTGACTGGCTCAATACAACCACTCTACAAGACATCTATGGGTTTGGTACTACAGTAATTGGACCAGGAGTTTACAGTGACTGGCTCAATACAACCACTCTACAAGACATCTATGGGTTTGGTAGTACAGTAATTGGACCAGGAGTTTACAGTGACTGGCTCAATGCAACCACTCTACAAGACAAAACCTGTCACTGTCCCTCCACATTCTACACCAACTGGTTTGTGATTCCTCCTTTCACAACCCTCAAAACCGATTCCCGAGCTGGTGGTATTTTTCCTCCTATGCTGAATGACGTCATAGAATCAGCATGTGGACGCTGTGAGCTTGGTAACGAGACGTCCATTGACTATGCGTATGACCTCCAAGGCGACCAAACCAGCCTTAAGCCAAACAGATATGGTGACCGGTATCCCATAACAATACTTGGACGTATCTTTGCTATCATCTGGGCACTGGTTGGTATCACAATGTCTTCTATTATGATTGGTGCTATCTGCTCAAATCTTACTATTACCATCGTGCAAGAATTTGGAGCGGGAGTTGCACGTGGAATAACGGGGACCATGGGAGGGACCAAACTAATAACGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTCTTATATAACGCATTTCACAATGTCTCAAAGCGCTTTACAACCGATGGAGGACTTTTCCGAGCTGCATATGAAGGCGTCAATGGCAGCCGAGCAGCTTACACTAGTCATGAGTAG

Transcript

Actinostola_05957

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07885	Ion_trans_2	Ion channel	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013099	Domain	Potassium channel domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR050379	Family	Type I Cytokine Receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23036	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004896	Molecular Function	cytokine receptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0019221	Biological Process	cytokine-mediated signaling pathway	Interproscan
GO:0019955	Molecular Function	cytokine binding	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-