Gene detail

Detailed information of Actinostola_05750 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_05750	CXC DOMAIN-CONTAINING PROTEIN-RELATED	scaffold56_size818591	292444	327764	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_05750

ATGCTTCATTGTTCTGCAAAGAGCGCCTTGATGACTATCCTAGTAAAGCTTGGTGGTGAATTGGAGCTGCAGAGACCGACCACAGGTCCTCGGAATAGTGTGCATGAAAGAATGGATGTGGAGCCTTCATCTCAGCTGCGAGTCGCTGTTGTTGACGCTATGGCAGAACTTCAATCCCTTGATAAGCCAGAGCCAGACGCTATCAAAGACTATTTGCAGTTGGCTGAGCACTTTAGCAGTACCCGAGTTAAAAGGCAGGCTGGTCAAGATCCCGTACATTACCGTATTACCAACTCCACACACATTGCCAAAGTCCGAATGAGAAGACTCCTGTCTCATACCAAGACAAAGAACGAGCTAACAAGCTATCTAGCAGAGAAGTTCATCGGACATGCTGAGAAGACGAAACTACGCGTTGTTGTGGCCTGGGGATGCACATGTCGTGCGACGCACCAAGATGTAGACCATCTTCAAAGTTATCAAGAAGAGGCGGATACCAAGATGCTGCTCCATGCTCTAGACGCAACTGCCAACGGTGCTACGGAGTTGTTTATCCATTCCCCAGACACTGACGTTCTAGTTCTATCTCTAAGGCGCTATCCAGAGCTGTGTGAGAAGACATCGTTCGTCACTGGCACTGGTGATAACCATCGTGTGATTGAGCTTGATCCAATTGCTAGTGCTCTAGGCAGTGCTAAACTGGCAGCACTACCCGCCTTCCATGCACTCAGCGGTGCTGATAGCACGGGAAGTTTTTCTGGTAAAGGAAAACTTGCTTGCTGGAAAGCATTTAGAGATGCTGACCAAGATGTCATAAGTGCTTTGGGGAACCTTGGAACCACGCTGCATCCAGCAGAGGAGACAGTGACACTTGTGGAGAAGTATGTCTGCCAGCTTTATCAGCCTAGAACAAGCATCTCACAAGTCAAACACCTCAGGTGGCAGATGTTCAGAAAGAATCAGGCTCAGTCGGACAGGCTACCACCTACACAGAGTGCACTGTATGAAGCAATTCTCCGTGCCCACTACCAGATATGGCAGGCAACACTCTATCCAAGGTTCATCAATATTTCGTTTGAGAAGGCAGCCTTAATGTTGGGGAGCAATGGGGCGTGGCCCAGAGAGAACCCTCCTCCCGAACGTCACGTCGAGTCTGCAAAGGACATACCCGCTAACTTTGATGCTCGTCAGCAATGGCCTGGATCGATTCATGCTATCAGAAATCAGGGTCAGTGTGGAAGTTGTTGGGCCTTTGGTGCATCAGAAACCTTATCGGACCGGTTTGCCATCGCTTCACGGAACCGAATCAATGTGATTCTCTCTGCACAACAACTAGTTGATTGTGATACTGATAATACCGGATGTAAAGGCGGCTGGCCGATCAATGCCTGGAATTACATGGTCAAAGTAGGGCAACTCGATGAACGCGAACTCGATCTTCAAGCGTTCGGCGGAGTTCGTGACCTGCGCACAATTCTGCGCACATGTCTTTTAACAGAACAGTGCTACGGCCCATACTATGCCATTCAGTACCAGTGTAAAGTCACTGCCAACACAACGCAATGTCCTGGGCAACCTGGATACCCTACAAGGTTTTACCATGCGAAAAACGCTTACAAACTCCCGCCTAGAAATATACCCGCGATGCAGACTGATATAATGACCTATGGGCCAATAGAAGGTGCAAAGCAGTGGCTTCAACAAACAAAATGTGATTTCCCCATGTTTGTTGATGATGACCGCAAACTCTATCGAGCACTTGGTCTCAAGCGGTCCGTGTTCAAAGTGTGGAGCACTTCTGCCTTGATTTACTATGCAGAACAGAAAAGAAAAGGGAGAAAGCTCGTTGGGATGTTTGAAGAAGACGACCCAACACAGATGGGCGGAGACTTTGTCATGGATTGCCATGAATTTCGAGAAGCCTTCTCGATTTTCGACGTCGATGGCAGTGGCACCATCACAGTCGATGAGTTGGAGATGGTCATGAAAAATCTCGGAGAAAAGGTGGACAGGAAAGAGTTGGAGCAGATGGTCAATGAAGTCGACGAAGATGGCAGCGGTGAAATTGAATTCGAGGAGTTCTGTGAGATGATGTCGAAGAAGATGCAGCAGGAGGAGGAGGAGGGCAGTGTCCTCGATGCATTTAACGAATGGGACGAGAGCGGCAAAGGAATGATAAAAGTTGATGAATTCAAGAGTATGCTGAAAAAGCTCCGTGAAGTCAGACTCACCAATAGCGATGTTGAACAAATGGTTGCCGTCCTAGACCCTGCCAAGAAAGGAGAATTTAAGTTTGAAGAAATGAACCAGGTCTTCAAGATGTTCGACAAAGATGGCGACGGTACTATCAGCACAGACGAGCTCGAAGAAGTCATGACATCAATCGGTGAAAACGCGCCATCACGGAAAGAACTCGATGATATGGTAAACGAAGTCGATAAAGAAGGTAAACACACCCCTATTTAA

Transcript

Actinostola_05750

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00112	Peptidase_C1	Papain family cysteine protease	Domain	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF13911	AhpC-TSA_2	AhpC/TSA antioxidant enzyme	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000169	Active_site	Cysteine peptidase, cysteine active site	Interproscan
IPR000668	Domain	Peptidase C1A, papain C-terminal	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR032801	Family	Peroxiredoxin-like 2A/B/C	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47018	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-