Detailed information of Actinostola_05562 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_05562RETROTRANSPOSONscaffold53_size854044317362378035-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF02145Rap_GAPRap/ran-GAPFamilyInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000331DomainRap/Ran-GAP domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR035974Homologous_superfamilyRap/Ran-GAP superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22955RETROTRANSPOSONInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0051056Biological Processregulation of small GTPase mediated signal transductionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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