| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Actinostola_05556 | WD40 REPEAT PROTEIN 12, 37 | scaffold53_size854044 | 627854 | 651689 | + |
| CDS | |||||
| Actinostola_05556 | |||||
| Transcript |
| Actinostola_05556 |
| Protein |
| Actinostola_05556 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF02931 | Neur_chan_LBD | Neurotransmitter-gated ion-channel ligand binding domain | Family | Interproscan |
| PF02932 | Neur_chan_memb | Neurotransmitter-gated ion-channel transmembrane region | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR006028 | Family | Gamma-aminobutyric acid A receptor/Glycine receptor alpha | Interproscan |
| IPR006029 | Domain | Neurotransmitter-gated ion-channel transmembrane domain | Interproscan |
| IPR006201 | Family | Neurotransmitter-gated ion-channel | Interproscan |
| IPR006202 | Domain | Neurotransmitter-gated ion-channel ligand-binding domain | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR018000 | Conserved_site | Neurotransmitter-gated ion-channel, conserved site | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR020472 | Repeat | G-protein beta WD-40 repeat | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR036719 | Homologous_superfamily | Neurotransmitter-gated ion-channel transmembrane domain superfamily | Interproscan |
| IPR036734 | Homologous_superfamily | Neurotransmitter-gated ion-channel ligand-binding domain superfamily | Interproscan |
| IPR038050 | Homologous_superfamily | Neuronal acetylcholine receptor | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19855 | WD40 REPEAT PROTEIN 12, 37 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004888 | Molecular Function | transmembrane signaling receptor activity | Interproscan |
| GO:0005216 | Molecular Function | monoatomic ion channel activity | Interproscan |
| GO:0005230 | Molecular Function | extracellular ligand-gated monoatomic ion channel activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006811 | Biological Process | monoatomic ion transport | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0034220 | Biological Process | monoatomic ion transmembrane transport | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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