Gene detail

Detailed information of Actinostola_05235 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_05235	CXC DOMAIN-CONTAINING PROTEIN-RELATED	scaffold492_size306189	191719	225761	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_05235

ATGGCGGATTCCACGAGTCAAACGTGCTTGGTGATACTTGCAGTGTTTACAGTTCTGTGGTCCCTAAGAGAAGCCAATTTTGAGCTGTACGTCGAAACACTGACGCAAATAGCGCCGTGGTTGTTTGCCTTGGACCATACTAACTATTCCAGATGGTTACCAATTCACATCCGCGATATGTGTGAGCTCCCCGTTAAGCATCCTGACGTCTTCCAACAGTTTAACAGTGGGTCGTTCGTTGTACACAAGACCAAGCGACAGTTTTCCGCCATAGCATTGGACCACGCGCATGAGCAAGAAAATGCATCGATAAAGGGAGATGGAGGTGCTGTTGGTTTAACAGAAAATCCTGCTGCCATGAGAAGATGGATGATTTCTGGTCCAGAAATAGCAAGAATCATCGAAGAATTTGAGAATGTCGTCCCGTCTAGTAAACATCTTGGACATCATGAGCAGACGCCTCACATACAAATATCGTTCAAAAAAGATGTCATGTCATTAACTTCTGAGATTGAAGAGCAGGGAAATCCATTTGAAGAGGAGGGAGAATATCTGATCGCTCTCCACAATAAAGATATCATGGATACCGCAGTAGTTCAGACGGTACGGACCATCATCCAAGTTGGTCAATCACAATATGACACCTTTGTTCAGGAAAGACTAGCAGACAGATCAAAGCCGATTTCAGACACAATCAAGAAGAATAACTTACCACTGTTTAACAAGTCTGGCAAGAAGCCCATCTCCAAAGAAAAAGCTCAGATCTTGACGTTGAAGGATGATTGTGCACTATTTTCTCGGCTCTATATTGCATGTCAAAGTCGAGATGGCAACCTTGAAGATTTTTTCAAATATGAGAATCAACCATGGCCACCAGCGCTTGCTCAAAGTGACCAACTAAGAGGAGGTCAAAAGGCTGACTTAGTAAAGTGTTTAGAATCTCTCCATTCGACTGAAGTGAATGTTCAACCACCTTGTGATGCAATAGTCATCGATGGAGCAGTAGCTGTTCAAATGCTAACGCCGGGAACAACATCCACATTTCAGGAATATTCTGACACAGTATTCAAGCCATTTATCAACAAACAACTTGAGTCAACAAAGAGAGTAGACATCGTATGGGACGTGTACTTGCAAGATTCTCTAAAAAGTGCAACAAGATTGAAGAGAGGTACTGGTCAACGACGGAAGGTCCTCCCATCCACGCGAATCCCTTCGGATTGGCGAGGCTTCTTGCGAGTAGATGACAACAAAACGGAACTCTTTGGATTCCTTTCACAACAAGCAATTACACTGACCACAGATGATGGAAAAGAGATCTACAGCACACATGGGGAACATGTCCTGACCTCAACAACAAGAGATGACATGACTGTTCTGGAGCCTTGCAATCACGAAGAAGCAGATACGCGCATTATTGTCCATGTCTTAAATGCTTGTCTTTCAGGTCATCGGCGGATAATGATTAAAACAAATGACACAGATGTTGTCGTACTTGCCATATCTGTAGCAGAAAGCCTTCCAGCAGCAGAAATTTGGATTTCATATGGCCTTGGAAAACATATGAGGAGAAAAGCAGTGCGCACAGGTGCAATTCAAAAGTTTCCGGGCAACGATTTGCCAAACTTCAAAAATAACAAACAGGCAAAAGCTGAACTAGAGGAACTAGCCACTTCTTTAATCGGTGATTGCAGTTACGAACCGGCAGGATTTGGGAAGGAGGGAATCAAGCAGCACATTTTAGATGTCTTCAACGAAAGAAGGAGGAATCACAGAAACGGCCGTGACTACGAACAGCCTGACAAGAGAACACTGAAGAGGAAAAGTACTAATGGCAATGTTAGTGCTAGTGATGCGGAGATATCCTCTCCTTCCTCTGTGCCTTCAGCATCCTCGGCCATTACAGATATCACGCCTGACAAGAGAACACTGAATAGGAAAAGTAATGATGGCCATGTTAGTGCTAGTGATGCGGAGATATCCTCTCCTTCCTCTGTGCCTTCAGCATCCTCAGCCATTACCGATATCACGAAGAGTACTACTTTCACTACTCCTATAGTGAAAACAGGAAGTCGAAACATTAAGAAACCCAAGAGATTTACACCTTCAGACTACGATGCCTGTCGTGGTAAGACTGATGGATTTCAGAAATTGAGATGTGAAAGCAGAAAGAAAGACGATGGCAAACATATGCACAACGATGTTGACGTAGCATACAGAAAAATTAAAGTCGGCATCGACGCCTTAGATGGTCCCAAACAAGACGAAGATTTGCCTTCAAAATTACCAAATGTAGAAGAAATAGAGGAAGAATCAAGTGATGCAACGCCATTTGAAGAGAATAGCGAGGAAAAAGCACTGCGCAGCTCTCCCTCTTCGCCATTTGCCCACCACTTTCGCAAGATATGGCAGAGCATTGAGAGCAATTGCGAAGAACCAACATGCAAAAGAAATTATTTCTTTAACCCTGCTCTCTGTGAAATCTTACTTCATGACTACCTTCCCACCGCTCCGTTATGGAGCGGAATCCTGATTCCATTCTTTTTTCCTGGAAGTTCTAAAGAGGCTCCTACTAGACTTACCAGTGGCAAGATGGAAAATTCTATAAAGGCTCTGAAGGAAGAGGATTTCAACGGAGAAAAAAAGATACCCATCCATCTATATGTCAAAAAACGCCTCCAGATGACTTTGGGAAGACAGCGGCTATTTTACAAGGGAGTTGTACAGAACTCGAAATGCCCGACAAAAGCACAAGTATCTCGCTTGCGGAATTGCCTTAACGAACCGTCACCACCGACGAAGAAAGTAAAAATGCACAAACCTTCCCCACCACCCGCAAAGAGAAAGCCAAAGCCTGTCGAGGAGAAGTGGAACAAGAGGATGCAAAAATCAAAAAACACCAAATTTCCAAAACTCGGCCGCTTTCAACAATCCCCAGTGAAACCATTTCCGGACTGTTTACACGACATTGAAAAGAAAAGAGAAGCAGGGAAAAAGTTTCGACAAACGAAAAATTCCACTGAAAAAGCTCAAAATCACACATCACAAGAAATATTCTCTGTCCCAGAGCGTCCTCGCTACAATGTTGTTCGTGGGTTAGCCAACTATAATAAGAGTACATGCTGGCTGAATGCTCTTCTGCAGTGCCTCTTAAACACACCCTTTGAAAACTTTTGCCACAATTTAAGTGAAAATGACAAGAAGAACATGGATGACTGCCAAAAGAGCATTTGCGCAGCAGTTTCTTCCTTGAAATCGGGAAGCAGCAGACCAATGAATAATAAATATGTGGCATTAGCAGTGACAAAGATCCTCCGTTTATCTGCTTTACAACAGCAAGATGCTAGCGAATGCCTCATCAAACTTGCAGAACACTTCTGCCATCCAGTTTGGGGTGAACCGCTGGATTTCATTCGAGGACAACTTAATGTGTCAAGTATTTGTACTTCCTGTGCCAAAGAGGTCAAGAGCAAAGAATATTTTTCCGTCTATCCAGTTCCACTACCCTGTGATGGCGAGACATCTAAAAACGTTGCACTGACAGAAATTCTTTCCTCGGCCTTTAATGGTAGCTTCTCTTCGTGCACCTCGGTGAATCCCCCCAGTCAGGACACTGACAAACTGAACCAGAAAGATTTCATTTTCATACCGGTCAATGAAAACAACATTCATTGGTGCTTACTGATTGTCAATAAGAGCGACAAACAATTATTGTACTTTGATCCAATTGGTGTCGCAGCTAGAGGATCAGATGATAGTGAAATGGAAGAAGAGAAAGGCGGAGAAGGCAATCGTAGTTGTATCGAAAAGGAAGACATCGCAACAAAAGATTCAGACACAAGTCCCGTGAGAGAAGATAGCGATTTAGATACAGATGACGACCTTGAGCGTATTGACCCAGAAATCGAGGAGTTCGTCAAAAACCAAATGCCACACCTTCAATCCATTCCAGATGTTTCTGACAACGAAAGACTACAAGCATCAGTGGTTCTTTCACGGTCAGAATTCAGGGAAATAATGATCGCGGAGAATATTGCTATGGAGCGATATTTCAAGAGTAAGATCTTCTTGCTACATAATAATTTGTTACAGCAGTTCGTCATCACGATTCCCGTAAAAGAGCGCGGTCTTTTCGGAGTATGCACTAGAGAATATGAATTCAAGAATATGCATGGAATAAGATCAAAGGGTGAAATGATTTCCTCGGTTCTCCTTCCGGAATTGCTGATCCAATATGCTATGAAGGAGGAAGATGTATCTTATAATACAGCCGTGTTAAACATATTTGGAACCCAGGACGGACACTCACTGTATTTCAATTCTCTAACCACCATAGTCAAAGACACCGACCTAAAGCAAAAGAACACGGGTGAAAAGACGTCCCGTAGAAAGGCAAAGAATCCAAGGAAAATTGTCAAGAAAATCTAG

Transcript

Actinostola_05235

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	DUB\|ULP\|ULP
Ubiquitin Family	DUB\|USP\|USP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan
PF02902	Peptidase_C48	Ulp1 protease family, C-terminal catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR003653	Domain	Ulp1 protease family, C-terminal catalytic domain	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47018	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-