Gene detail

Detailed information of Actinostola_03664 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_03664	GLE-1-RELATED	scaffold30_size1035253	125262	130515	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_03664

ATGATAGCAGACATGAAACGACCAGTGAACGGGCAAGACAATCGCATCAATTTGGACAAACGAGTAAAGCGACGGTACGACCGCAACAATACCTGGAACGACCAGCAAACAGGCACAACCGACCGCAACAATACCTGGAACGACCAGCAAACAGGCAGAACCGACCGCAACAATACCTGGAACGACCAGCAAACGGGCAGAACCGACCGCAACAATACCTGGAACGACCAGCAAACAGGCAGAACCGATCGCAACAATACCTGGAACGACCAGCAAACAGGCGGAACCGACCGAAACAACCAAGAACGACCAGCAAACAGGCGGAACCGACCGCAACAACCAAGAACGACCAGCAAACAGGCGGAACGACCGCAAAAATCAAAAACGGCCAGCAAACAGGCGCAACCGACCGCAACAATACCTGGAACGACCAGCAAACAGGCAGAACCGACCGCAACAATACCTGGAACGACCAGCAAACAGGCGGAACCGACCGCAACGATCAAGTACGAGGATAATCAAATGAATGTTATTGAAGGTCTACGTAACACGTCTAAAGGACAATTACAATATGATCTACATTGGATACCAAGCGAGCAAAAACTCGATCAGTGTTCACGTTCACCAAGCATTTCTTGTCAATTCTCTCGTGTTCTACAAGGCTTACAAGGACCGAGTTTCCTTGGAGAAACGAAAGAAGATAACAACTCACAAACTAAGAGCAACAGTGGAGAAGATAAAAGGCTTGATTGTACAACAAACAGTATAAATACGCTTGGACCTGAGTATTACGACACAACTCATGTCAACTTGTATCGATATGACGAAGAGAAGAAAGAACAAGCAAAGCAAAGGATCGAAGAAAGGAGGAGTTGCTTTAAAACACATTCGGATAAACTTCAGGAAGAAAAAAGCCGTATCCTTCATCAGCAGTTCGAAGAAAGACGAGATAAATATCTAGAGCTCCTTCAGAACATGAAACAAGACTTAAGGAATTATGAGCTTCAGGCTGCAATAAAGCAGAAAGCTTTGGTGCTGCAGCATGAGAAATCTGCAGCAAGAGCTTCTAGAAAAGTACAACACGTTGTTGAGTTAAAGAGAAAGATAGCTGAGGAAGAAGAAAGACACAAGAAGGAACTTTCAATTTTGCTGAAATGGCATCAGGATACCATTGTCATTTACAAGGAGCTGGACGCAACAATCAGGAATTGTAACTTTCAAGATCACTTACAGCCCAAAATAACGACTATCATGGAAGAAGCAAAGAAGGTGTTGAATCTTTCTGTGAATACTTTAAGTGATAGTAGATCAGTTGGTAAAGCAGTAGAGGGAGCACTTCAACACTTACCCGAGTACTGTAAGATCATGAAAATGCTGCTTGACAATGCAAGACAAGCTGTAAGTGATGCAGAGTACAAAGTCAAGAAAGAAATGGCTGAGAAAGAGGCAAAGAAGAGGGAAGAAGAAGCAAAGAGAAAACAAGAAGAAGAAGCCAAGAAAAGGGAAGCGCAATTAAAAGCTGCAAGTGTGACAGAGTATCTGTCTAGTAGTATATCAAGCAGTTCAGTTCAAGAATACAGCAAGTTGTACTGCCGTAACCTCCTGGCTCTGAAGATAGTGCAACAGGGTTCACAGCAAGTTTCATCCAATCACAATGCAGCATTCCCCTTAGCAAGTGTTGTCATTGGAATATGGTGTGCTTTTCCAGATGTTGGTGAGCTCGTCCTGGGTCATTTCTACAGTCAGTGCCCTTTCTTAGTTCCTATGTACATGCCACAACCTGAAGGAATGTCTGATAAAGACTATTTTAAAAGCTTAGGTTACTTATGTGAAGATGGTGAAATTGAGCCTCGAGACAAGTACTTGAAGCGTATTTCTGGGACAATAAGACTGTATGCTGCTATTGTCTCCTCTGTACCTCCAAGAGGGTCATCTACAAATCACCCTCATGGAATCACATATGGCTGGATGTGGCTAGCAAGAATTCTTAACCTTCCACCCAAACCAGACTACACTGCAACAGCACTGTTTGAATTCCTTGACATCACTGGACACGCCCTACAGAAGCAGTATCGTAGTCAGTTCTGGAAGCTCATTCTTGTGATTGTGAGGGAACTGATACCAAAAATCAGACAGATCACAGCTCCTTCCCAGAGTGGTCCTATTGTTAGACTTGAAAGTTTTCTTGAAAAGGCTTTTCAGTCCAGATCCTTTCAAAGACCATCAGGGTACCTTGATGCAAACTGGTGGAATTCAGCAGGCTTCTCTGGAATTTATGGCCATTAG

Transcript

Actinostola_03664

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07817	GLE1	GLE1-like protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012476	Family	mRNA export factor GLE1-like	Interproscan
IPR038506	Homologous_superfamily	GLE1-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12960	GLE-1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000822	Molecular Function	inositol hexakisphosphate binding	Interproscan
GO:0005543	Molecular Function	phospholipid binding	Interproscan
GO:0005643	Cellular Component	nuclear pore	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016973	Biological Process	poly(A)+ mRNA export from nucleus	Interproscan
GO:0031369	Molecular Function	translation initiation factor binding	Interproscan
GO:0044614	Cellular Component	nuclear pore cytoplasmic filaments	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-