Gene detail

Detailed information of Actinostola_02082 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_02082	DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED	scaffold186_size507594	198345	218562	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_02082

ATGGCGCTTTGTTATGGTCCTCGTTGTAGTTTTCGTTTCCAAAAACACTGCTACGTTGCTGTAAAACCCAAACTATCCCATCTTTTCTCGACTATCCAACAAGCCAAGCGTATAAAGACAATCCACGAGATACCGGGACATCGAAACTATTTCCCCAGCTTTAGAGCGGTGTTGCAGCTTCTTCATACGAAGCTCACTCGCCGAAATAAACCTGATAGGAAACTCTATCTGGAAAAGCAGTTCAAAGAGGTGGAAAAGTTTGGACCCATATATAAGGTGGAACTACCAGGATTAAGAGCCATCAACCTAGTCGACCCCACCGAAGTTGCTAAAATCTTGCGTAGCGAACCCAAGTACCCCACACGATTTGATCTACCGATTTTGAAGTACTATCGCAACACAAGGAAAGCTCTTCCTGGCATTTTCTTTGCCGATGGAGAAGATTGGTACCGATATCGCAGTATGGCGAGAAAACGAATCCTACGACCACAAGATGTAGCTGAGCACGTGCCAGTATTCAACGACATCATCACAGACTTCATGACACGACTCGACGCTATCCGAGGACCGGCTGGTAGTGATGCTGAACACGAAGTCAAGGACATTGACAATGAACTGTTCAAGTGGTCGTTTGAGTCAGTGGCCCACGTTCTGTTTGATAAAAGATTTGGGTGTCTAGATAATGAGGTCAATCTAGAAGCCCAAGGCTTTATAAAGTCTATTGGCATCTTTATATCGACAGCTACTAAACTGAATTTCCTACCAGTTTGGGTGTACAACTTTTACAAGACGGATACCTTCAAGGAATTTGTATTCCATTATGACAACATGTACAAGTACGCCGATCTTATCATCAAAAGAAAGGTTCAGGAATTAGAGCAGAAAGAGAAACTGGATTTACAGATGCCAGCACAAAATCTCGGCCATACAACACCAGAGAAGGTTGGCTTTGTGGAATACCTTCTTTCCAATGAGAAACTCTCCAGAGATGACCTTTTTGCAAGTATCATTGATTTGTTGTTTGCTGGAGTGGATACAACATCCAATACAATGCAGTGGTTTCTGTATATGATGGCCAAAAATCAGGACAAGCAGGAGAAGCTTTTCCAGGAAGTGAGAAACCTCACACAGTTTGCTGTGGATCTTGATTTTGTCATTGAGGAATATGCAGCAAGCAAAGGGAAGTTTCCACCAAGAAAGCGGAGAAAAAAGAAAACATTATACATTGCCACTATTGAAAAGGCTAATGGATTGGTCAATAGTTTTATCGAAGAGTCAAGAATTGATTCTCTTGGACTCGTGGTTGTAGATGAGCTTCATATGATTGGGGAAGGGGGACGACGAGGCTCTACTATTGAATTATGTTTGACTAAACTCCTGTATACTGCAGGCCATGTACAGATAATAGCAATGAGTGCCACTTTGGGCAACATCAAAGAACTGCAGCAGTTTATGAAGGCTGAGGTTTATACCAATGATTTTAGACCGGTCAAGTTAAATGAATACATCAAAATGGAGAACAAAATATATGAAGTCATTGACAGTGACATCACTGAACAACCTGTACGATGTATTCCAGTCCAGTGCACTATACCTTATGGTGTGGCATACCATCACGGTGGGCTGACGATGGATGAGAGGAAGTTAATAGAAGACTCTTACAGTAAAGGAACATTGTGTGTACTCACATGCACCTCGACTCTAGCGGCAGGAGTGAATCTACCTGCAAAGAGAGTTATTGTTCGAGCGCCATATGTCGGTTGCAAAGTCATCAGTCGCAGTCAATACAAACAAATGATAGGTCGTGCAGGGAGAGCAGGCATTGATACATCTGGTGAAAGTATTCTGATACTAAAAGAGAAAGATAAGTACAAGGTGGCTCTTTCAAGCGATAAAGAGAAAAAAGCCACAAGTACAATAGGAATTTCAGAGATTTATCTGCTCGGAAAGGCTTACGGACAAAAGCTCATCAAGTGCACCGACGAAGCAGCAGTTTATCGGTTTTACATGACTCTCATACTGTACAAGTTGGTCCAAGGAGAATCCATTTGGATGGTCGCAGATTTGTTCAAGGTCCCTCGAGGATTTGTGCAGAATCTCCTGACGTCTGCTGCCTCTTATGCCACGTGCCTGGTGCACTTTACGCAGGTCGCCTCCCAATAA

Transcript

Actinostola_02082

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067	p450	Cytochrome P450	Domain	Interproscan
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF21099	POLQ_helical	DNA_pol_Q helicase like region helical domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001128	Family	Cytochrome P450	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR002401	Family	Cytochrome P450, E-class, group I	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR048960	Domain	POLQ-like, helical domain	Interproscan
IPR050474	Family	Helicase Hel308/SKI2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47961	DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-