Gene detail

Detailed information of Actinostola_01944 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_01944	2,5-DIKETO-D-GLUCONIC ACID REDUCTASE	scaffold176_size519441	141969	160636	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_01944

ATGGCGAAGATCGCGTATTTTGGTGTCGCTATTTTGGTGGCCATACTGGCCGTTACATTGTACTTGGTATATCAAACACAACCGATTGGAAACGACATTGAAGATCACATACCAGACCCTAAATACCGAGATCCCTTGGAGGACAAAACTGTGGTTGATAAACCGCAAGATACACTTGAAAAAAGATCGCAATTAAAACATGAGAAGGAAGGAGAGAACAAAAGTGAAAAGGGAACGAAAAATGAGAAAGTAAACAGAAATGACAGAGATACTTCCGAGTCTAAAACGGAGAAAGAAGGTGAACAGCCACAGATACCAAAAGGTCATTTAAAGTACCTAGGAGACCATGGTTCGCCCATTAAAGTGGGAGAGATCGAAGAAGTGGAGTTCGCTCCCAATGGACGCGATTTCTACCAACATTTCGTCAGGAAAAGAAAACCACTTGTCATGAGAGGAGCCATCAAACAATGGCCTGCTGTCAAAAACTGGGCCAACGAATCGTACTTGCGCGAGAACTATGGCGATACCATTTTTGACATTCAGTTTACCAAGAAATACGAGACCATACTACCAATCAAGAAAACGATGAGTCTAAATCAATATCTTGATATTTACACAAAAGAAAACGTTTATCTAGACTGCCCGTTCCCCCAAAGTGCAATGACACAAGACATTGTAGTGCCATACTGCCTTCAGTGCGATGAATTCGAAGACTCGATACAAAGTACACACCTACTCTTTAGCAATGGAAACACGAGTTCCAGCATTCACTATGATGGATCTGAAAATCTCCTGAGCGTAATATCAGGCACCAAGGAAATTCTCGTGGCGAATTATACGTACGAATCGGCGTCTTTTTATTTGGAAAATTTCACCACCGTCAACATCGAAGCGCCCATCGATCCAGAGGCCGTGGATCTCATTAAATTCCCAAATCTAGCGCAAGTAACGTTTCACAAGTCGATCGGTCCGTCGCACCCGCCAAGCATGGCGAAGATCGCGTATTTTGGTGTCGCTATTTTGGTGGCCATACTGGCCGTTACATTGTACTTGGTATATCAAACACAACCGATTGGAAACGACATTGAAGATCACATACCAGACCCTAAATACCGAGATCCCTTGGAGGACAAAACTGTGGTTGATAAACCGCAAGATACACTTGAAAAAAGATCGCAATTCCAACATGAGAAGGAAGGAGAGAACAACGGCGAAAAGGGAATGAAAAATGAGAAAGTAAACAGAAATGACAGAGATACTTCCGAGTCTAAAACGGAGAAAGAAGGTGAACAGCCTCAGATACCAAAAGGTCATTTAAAGTACCTAGGAGACCATGGTTCGCCCATTAAAGTTGGAGAGATCGAAGAAGTGGAGTTCGCTCCCAATGGACGCGATTTCTACCAACATTTCGTCAGGAAAAGAAAACCACTTGTCATGAGAGGAGCCATCAAACAATGGCCCGCTGTCAAAAACTGGGCCAACGAATCGTACTTGCGCGAGAACTATGGCGATACCATTTTTGACATTCAGTTTACCAAGAAATACGAGACCATACTACCAATCAAGAAAACGATGAGTCTAAATCAATATCTTGATATTTACACAAAAGAAAACGTTTATCTAGACTGCCCGTTCCCCCAAAGCGCAATGACACAAGACATTGTAGTGCCATACTGCCTTCAGTGCGATGAATTCGAAGACTCGATATCCAGTACACATCTACTCTTTAGCAATGGAAACACGAGTTCCAGCATTCACTTCGATGGCTATGAAAATCTCTTGAGCGTAATATCAGGCACCAAGGAAATTCTCGTGGCGAATTATACCGAATCGGCGTCTTTTTATTTGGAAAATTTCACCACCGTCAACATCGAAGCGCCCATCGATCCAGAGGCAGTGGATCTCATTAAATTCCCAAATCTAGCGCAAGTAACGTTTCACAAGGATGCATTAACAAGAATGGACAGGTTTGGAGAGGCTGTCAAGACTGCTCCAGAAACTATTGAATGTCAATCTCAGAACAGACCAATCAGTGAGGTGTACTGGCCAAAGGATAATGAAGAAGGCACAGGTATCCCAAAGATAGAAGATCCTGACAAATGGATTGCGACCTTGAATAGTGGATACAAAATGCCAATGAAAGGATTTGGTACTGGATTCATGAATGACACCAAGACATCTGTTCTTACGGCATTAAAGACTGGATACAGGATGTTTGATGCAGCTGAAGCTTATATGTATAACGAGACAGCTATTGGCTCCGCGGTAAGAGAAAGTGGTGTCCCACGAGAAGAGGTTTTTATAGTGTCCAAAGTACATCCTAAAAACATGGGTTACGATGATACACTTAGATCTGTGGAGAAATCACTTGAGAAATTCCAGATGTCATACATCGATCTGATGTTAGTTCATGCACCAGATTGTGACGATGAAGATGGTGGAATGCTACTTTGTGGGGAAGGAGAGCCAAGAGGGACATGGAAAGATTCATGGAGAGCTCTGGAATTGATGGTCAGCAGTGGGAAGGTCCGTAGTATTGGTGTGTCCAACTTTGAGGTCTACCATTTAAAGGAGTTGAAAGAGATAGCAAAGATCCAACCAGCAGTGGTACAGAACTTTTTCACGCCTTTTTACCATGACAAAGAAACCAGGAATTTTTGTAAAGAAAATGACATAAAATACATGGGATTTAGTACACTTGGTAGTCAATATAATTATGAGGTTGGCTTTGACCACAATCCTGTATTGGAAGATGAAGGGATCAAAAAGATTGCTAAGAATTTTGATGCCTCGGCAGCCCAGGTCGTACTTAAGTGGGCCCTGGAGAATGATGTTATGGTGATCCCTAAGACCAGCAAGCCAAATCATATCCATACCAACTTCCATCTGCATCATATATACCTCAGTGATAAAGACAAAAATTATTTTGAGACACTTGATGGTAAACTTACTGAAGACAACAGCACTGAAGATAATGAAGAAAAACAAGACGAACAAAAAAATCAAAGAGAACCGAGGGATAAGACACCACCAGTAAGAGATAAAGAAATCATTGACAAACTGGTCCTAGAGAAAAAGGTCGAACCCGATGACGCAACCCTTTACGTCAGCTCAGATGACCAATGGATTTATGCAATCGATGCGGTGACCGGGAATCTCAAGTGGAAATATGGTACAGCCGAGGATGGAGGATCCAGGTGCGCCTTCAGTCCTGATGAGTCAGTGGTTTACTGTGGCACTGACGATAAACACATACGGGCATTTAACCGTTTAGATGGAACCCTTTTATGGAAATTCAAGACGGATGGAGCCGTGACGTCATCAACGAGTGTGGGGACTGATGGGACGTTATATGTTGGGTGTTTAGATGGTTTTATGTACTCTATCAAACCAAATGGAGCTCTCAAGTGGAAAAAGCATTTAGGAGAAACGATTTGGTCGTCCCCAGCTCTCAAAGATGGTGGTAAAGTAGTGTTCGTTGGTTCGATGTCAGACGCTCAATCCAATGTGTTTGCTCTCAATGGAGAAACAGGGGACACTATATGGGAGTACAAAACTGGTGGACCCGTATTTTCTTCTCCTGCCCTCAACCAAGATGGAAAAATAATGTATATATGCTCTTTCGACGGGAATTGCTATGCGTTTGACAGCGACAGTGGGAAGGTTGTGTGGGTTTTCGAAGGAGATGCTGCTTTCCAATCTTCGCCTATTTTGAGTCATAGCCACGCACAGATGTACGTAGCATCGACAGGAGGCATGGTGTATGCAGTCGATATGAGGAATGGGTCACTTGTCTGGAAGTATCGCTCGAAAGGTCAATTCTTTTCGTCTGCTTTCCCGTCCAGTGATGGTAACGTGTACATTGGTTCTGGCGATGGCGTAGTATTAGCACTTAGCCAACGTGAGGGGAGCCTTATATGGAGCTTTGAAACAGAGACTACAGATATGGTGTACTCCACGCCCCGTATGACCAACAATGGCGTACTCTACATTGGTGGTATAGACGGCTACCTATATGCACTGAAGTCCGATAATGGAGAGCTTGTGTGGAAGTTCAAGACCAATGGCCCTCTGGTTGGTACAGTACGTATACCAGCCCTACACGACAAACCACAGTCCTAA

Transcript

Actinostola_01944

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00248	Aldo_ket_red	Aldo/keto reductase family	Domain	Interproscan
PF01011	PQQ	PQQ enzyme repeat	Repeat	Interproscan
PF13360	PQQ_2	PQQ-like domain	Repeat	Interproscan
PF13621	Cupin_8	Cupin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002372	Repeat	Pyrrolo-quinoline quinone repeat	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR018170	Conserved_site	Aldo/keto reductase, conserved site	Interproscan
IPR018391	Repeat	Pyrrolo-quinoline quinone beta-propeller repeat	Interproscan
IPR020471	Family	Aldo-keto reductase	Interproscan
IPR023210	Domain	NADP-dependent oxidoreductase domain	Interproscan
IPR036812	Homologous_superfamily	NADP-dependent oxidoreductase domain superfamily	Interproscan
IPR041667	Domain	Cupin-like domain 8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43827	2,5-DIKETO-D-GLUCONIC ACID REDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-