Detailed information of Actinostola_01125 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_01125E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATEDscaffold1373_size1259453443555877-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF01436NHLNHL repeatRepeatInterproscan
PF19282Exportin-TExportin-TFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001258RepeatNHL repeatInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR045546DomainExportin-T, C-terminal domainInterproscan
IPR050952FamilyTripartite Motif and NHL Repeat Containing E3 LigasesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24104E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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