Gene detail

Detailed information of Actinostola_00766 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_00766	CYTOKINE RECEPTOR	scaffold1225_size192281	153158	183158	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_00766

ATGTCAGCCTATCACCCGGAAGGAGATGGTATGATTGAGAGATTCAACCGTACAGTCATCGGTATGCTGTCCAACTACGTGAGCGACAACCAACGAGACTGGGACTGTCACTTGCCTCAGGTGATGATGGCATATCGCAGCAGCGTGCACGAGTCGACACGCTACTCGCCATTCTACATGATGTTTGGTCGAAACATCCAGCTACCAATCGACATCATGTATGGTAGAGCACCTGAGGAGCCCCAAGAGACAGTTAAATACACTCGTCGTCTGAGAGACTCCCTGGAGGCAGCGCACGACATGGCACGGACACATCTACAGGCCGCTCAACGACGACAGAAGGACTACTACGACATACGCGTAACCGGCAAACCGTTTGAGGTTGGGGACAGAGTACTACTGTCAGTCTCTGCTGTCAAGCCAGGTCTGAGTCGGAAGCTTCACCATCAGTGGCAAGGCCCTTACATCATTCTCGACAAGGTATCTGACGTAAATTACCGCATTCAGCTAGAGACGGGACAAGGTAGGAAACAAGTGGTCCACTTCAACCGCCTGAGACGATTTAACCACGCTAGACTGTTTGCGCCGCTACGTCTGAATGGGGGCGATGGTAACGAAGCCAACACAGACGAAATGGGACGAGAAGACAGATACCTCCCCGATGCGACCGACGAACTCTACAAAGATAATGGGTTCATTATCGACGAACGAAGACACACAGAACGGCGTGTTTCGGGAGTTGGTCGACGCTCTGACCGAAAAAAAACAAGTCCGAGTTTAATGCTCGACGGCGGGGACAGGATGAAAAACTCATCGATCTTTCCGCCGCGATCGGCAATTAAGCTCGCACGAAAAGCGTTCCCGGGTGCCCCCGCTGAGATCGTTGACCAACTCGCCAAAGATCGATTCATTGAGGCACTTCGCAGCAGAGATCTCCGGATTAAAATCCGCGAAGGAAGCCCGAAGACCTTGGACAATGCAGTGAGTCGTGCCATCCAACTCGAATCTATCTACGAAGCCGAAGGCGCCCCACCTGCACCAGAAGTAGGTAACACTAGTAGCATCAGTGGTGATGTTACTAACATTACACTGTGGAATGCTTCAGATATCAATGGACCAATCAGAGCATACCAGGTAATCGTTAATGAAGTAAAAGGTGGCGATAGAAGAAGGCGTTCCATTGACGAGGCCAAACTAACAAACTATGCCAAAGCAGAAGAAGATGGTCTTTCTTACTACATAACAGCTCAAATAGTTGCTCCAGCCTCAAAGTCATTCCCACGACAACTGAACTTCACTCTTGGAGATGAAAGAGAGTACGGGGAGTATCAAAATGTTAAACTCAAAGAAGGAAAGCAGTACCAGGTGTATCAAAGAGCTTTGACACAAGATGGAAAGAACCTAAACTCGGACTCGGACTCGGACTCGGACTCGGTCTCCGACTCGGACTCGGATTCGGACTCGGACTCGGACTCGGACTCGGACTCGGACTCGGACTCGGACTCGGACTCGGACTCGGACTCGGACTCGGACTTTGACTCGGAATCGGAATCGGAATCGGAATCGGACTCGGACTCGGACTTGGACTCAAAATCAAAATACCTTTATGGTTTAAAGAGTATGATTGCAGAGGGCAAAGTTCCTGTCACTAAAGGCATGTTAAAACGACCTACTTCCCCCTCAATAGGTGGCTCTAATAAAACCGCTTTGATAGCTTCATTAGTAGCAGTTTTGTCTCTTGTTATCATTGCCATTGCTCTTGTTGTTGCTGTGGTGTTCTGGAGAAGGCGAAAATCAGAGGGTAGATCAGCGAAAGAAGACGGATTTAGTAACGATCTCAATTCCAACATCCATGCTGAAGAAATGAATGAAATACCACGCAGACCTGAAGAGCAAAAATCTGAGGAAAGTGCAAGTTTTCAAGGCAACAGAAATGAAGCATTATTACCTGTTGATGACGCCGATCTTTATGGTAATGCAGAAGCCATACGCTACCAACCTATCCCTGTCAACAAGTTTTATCAGTATGTCAATGAAAAGAAAGCTTCACCGAACTCCTTCATGGATGAATTTAGGCCGGCAGTCAGTCAGTCAGTCAGTCAGTCAGCGAGTCAGTCAGTCAGTCAGTCAGCCGGCAGTCAGTCACTTCTTTCTAGTGGACAACTGTTTCCATGGGATCTTGCTAGGGACCCAGCGAACAAGCCAAGGAATAGATATGCAAACATTATAACATACGATCATTCACGAGTTATTTTACAAGAATCGTCCAGTGGATCAGACTATGTCAATGCATCGTACATTCCCATTAGGATAGATTATCTGCTGGGTATAGACACCCACCAGGCTAGACGATCATATGATGAAGACAACGGACTTTATGCGACTGCTAGAGACGAGATTTCCCACCCTATACATCCAAGAGGTCCGTGCGGCACACCCTCACCATATATAATTATGGTTAAGTGTCATCAATACTGGCCAGAAAAAAAGGAAAAGTACGGACCTCTGACAGTTAACCATCATCGTTGTGATGTTCTGGCTGACTACGTTGTGAGGACTTTATTTTGA

Transcript

Actinostola_00766

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan
PF18861	PTP_tm	TM proximal of protein tyrosine phosphatase, receptor type J	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR041201	Domain	PTPRJ, transmembrane domain	Interproscan
IPR050713	Family	Receptor-type Tyrosine-protein Phosphatases/Ushers	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46957	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:1990264	Biological Process	peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-