| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Actinostola_00604 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) | scaffold116_size611073 | 51779 | 97539 | + |
| CDS | |||||
| Actinostola_00604 | |||||
| Transcript |
| Actinostola_00604 |
| Protein |
| Actinostola_00604 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03564 | DUF1759 | Protein of unknown function (DUF1759) | Family | Interproscan |
| PF05380 | Peptidase_A17 | Pao retrotransposon peptidase | Family | Interproscan |
| PF13374 | TPR_10 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13424 | TPR_12 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF17921 | Integrase_H2C2 | Integrase zinc binding domain | Domain | Interproscan |
| PF18701 | DUF5641 | Family of unknown function (DUF5641) | Domain | Interproscan |
| PF18738 | HEPN_DZIP3 | DZIP3/ hRUL138-like HEPN | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR005312 | Family | Protein of unknown function DUF1759 | Interproscan |
| IPR008042 | Family | Retrotransposon, Pao | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR021109 | Homologous_superfamily | Aspartic peptidase domain superfamily | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR040676 | Domain | Domain of unknown function DUF5641 | Interproscan |
| IPR041249 | Domain | DZIP3-like HEPN domain | Interproscan |
| IPR041588 | Domain | Integrase zinc-binding domain | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR051787 | Family | Effector and Ciliary Development-Associated Protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45641 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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