Detailed information of Acti_049045-T1 in Actinernus sp. WN-2022 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Acti_049045-T1RETROTRANSPOSONScLC4GM_8552451362524519582-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22955RETROTRANSPOSONInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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