| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Acti_048294-T2 | LYSINE-SPECIFIC DEMETHYLASE | ScLC4GM_19 | 105701062 | 105728133 | + |
| CDS | |||||
| Acti_048294-T2 | |||||
| Transcript |
| Acti_048294-T2 |
| Protein |
| Acti_048294-T2 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01388 | ARID | ARID/BRIGHT DNA binding domain | Domain | Interproscan |
| PF02373 | JmjC | JmjC domain, hydroxylase | Domain | Interproscan |
| PF02375 | JmjN | jmjN domain | Family | Interproscan |
| PF02928 | zf-C5HC2 | C5HC2 zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001606 | Domain | ARID DNA-binding domain | Interproscan |
| IPR003347 | Domain | JmjC domain | Interproscan |
| IPR003349 | Domain | JmjN domain | Interproscan |
| IPR004198 | Domain | Zinc finger, C5HC2-type | Interproscan |
| IPR036431 | Homologous_superfamily | ARID DNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10694 | LYSINE-SPECIFIC DEMETHYLASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000785 | Cellular Component | chromatin | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006338 | Biological Process | chromatin remodeling | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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