Gene detail

Detailed information of Acti_043818-T1 in Actinernus sp. WN-2022 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Acti_043818-T1	EPOXIDE HYDROLASE	ScLC4GM_1753	14892902	14935991	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Acti_043818-T1

TTTGTGGCTTGTGCAGTTGTGGCTAGGCTGTGGGTGTTTCAAGACTGACCATTTCTTTAATATTTTAAGCAGTGCGTTCAGTGTAACAAAGGGCTTGGCTTTCTCACACTGCTTTTAAAGTATGACCAAATTGGTTATTTTCGATCTCGGAGGGGTTGTGGCAACAACTCCCCAGTTCGCCATTCAGCGATATGCCTGGGAAAAGGGACTGCCGCTTTCACTTCTTCAGAAGTTATTTCTTCCAAGTGGCAAAGATCACCCAATGTTGCTGCTTGAAGTTGGCAAAATATCTCTCAGCCAGTTTAGCAGACTTGCAGAGGAGTTCATTGCAAACATAGCAGAAGACGAAGGAATCAAGTTACACAAGGACTTCAGTGTGGAAAGTCTTTTCAAGGAAATCCCCAAATCACTCAGAGTTGTTCCTGAGATGCTGAATGCATCTGCAGCCTTAAGAGCAAAAGGTATCAAGACATGTGTTTTGTCTAACAACTGGACTGACGACACTGAAACAGGAAAGCAAGTCTCTAGCATGGCACTGTTAACACATCACTTTGATGTTGTGATAGAGTCTTGTAAAGTTGGCATGCGTAAACCTGAACAAGACATTTACAAACTTGCTTGCTCAAGGACAGGAGTCCAAATAAATGAGACTGTTTTTCTTGACGACCTTCCTATGAACTTGAAGCCAGCAAAGGAGATGGGAATGACGACTATTCTTGTCAAGGATCCAATAACAGCACTAAAGACTTTGAAGGAAACTACAGGAATTGATGTTTTTGAGCCACACCCAGTCCCACCCTGTAGACCATGTGGAGTACCGCACAGTCTGGTCAAACTGAGGACCGGTATCACACTCCACTATGTTGATGTAGGACAGGGCCCTGCTGTTCTCTTACTTCACGGCTTTCCTGAATTGTGGTACATTTGGAAATATCAGATATCAGCCCTTGCCTCAAGTGGTTATAGAGTAATCGCACCAGATCTGAGAGGATATGGACAGACTAGTAGTCCACAAGAAATCAGTGAATATTCCCGTGAAAACTTTTCCAGTGATGTCATAGCATTAATAGATTGCTTGTTCTTGAGACAAGTGACATTAGTTGGTCATGACTGGGGTGGGATGGTGGCCTGGGACCTCTGCTTACACTACCCTGACAGGATAAGAGCTGTGGCCAACATGTCACCATTCATACCTGCCAATCCACAGATGAACCCACTGAAGGCTCTCCAGGCCAAGCCAGGAATATTCCAGTATCAGCTTTACTTCCAGAAGGAGGGACCACCTGAGGCAGAATTTGAGAAGGACATTAGAAGAACATTTATGTTACTTCTCAGAGGAGCTAAGGATCAGATTCTTGGAAAAGAGCTCAGCACTGCTAATGTTCTAGAAAGAGGTGGGTTTTTAGCAGGCGCTCCTGCTGCAATTGAGAGAAGCTCCATGATAACAGAAGAAGATCTTGGTTATTTTGTAGACAATTATAGAAAGACTGGCTTTAGAGGACCTTTGAACTGGTACAGAAATATGGAAAAAGACTGGCTTTGGAACCTGAAAACTGTAGGCCGAAAGATCCAACAGCCTGTACTAATCATAACATGTGGAAAAGACCCTGTTATCAGACCTGAGTTCAGTGCACATATGGAAGACAGGGCCCCTCGTCTGACACGAGCTCACCTCGAGGACTCATCCCACTGGACACCTCTTGACTGCCCACTGAAGTTGAATCAGATCTTGCTGGATTGGATGAAGAGCATTCACGATGGCAGTGAGTCCTCCAAACTTTGAATCAATGTGACGAAGATGATCCATCCTTCCTGAGTGAAAAAGATCTAGCTATAGAAAATAGAAGAGAAGACGTTTTTAGCTTTCTGCGTTCAAGGTGGACTAGCACCATGCAAGCAAAGGAAAACAAATGGACCACAGGCCACTCCCCGGGGGTACTCTACCCAAAGTTGGATAGATTGGGGCCGCTGGGGCTCTGAATCCCTTACCCTGTTTAAGACAAAAACAAATCCAATTGCCATACCCTGTTCAAGACAAAGTGTTAAAATTCTATATCACTCTATAAGACAAATAACAAATTATCTATACTTGGATGTCAGTGTTTATTGTGATCTTGTATAATGAGTGTCATAACCATACCCTGTCCAGCGGATCATCCCTGTATAGTCCATATTATATGGGAGTACCCCACCCCCTGGGGGCCACCCTGGGTTGTTATCTGTGGAGGAGGCTCTGGTGTCCTGGGTACCAAAAGTCCTCCTTGCTAAGTTTACTGACACGATAGAGGGCTAGGTTTTACTGTTGTGGATGGACTTTGACCCAAGTGGTGTAACATTTTGATTGACACAATCTAAGCCAATTAAAAAAGGTAATTTCATTAATGTCAGTCGTATGATACCACAAGCGTCACGTCATTTTTTGTCAGTCAATGAGTGAGTGTGTTAGAAAGAGCTAAGTAAACCCCGTTGACCATTCAACATTTGTATCCGGAATTCGAGATGCAATGATATTAATGGTCTTCTTATTCGCCCGGCTATACATCAGAGAACCTAGTGCTCCATTCCCGAGGTTCTTCTCGTGCCCCCTGCACTCGCTGATCGCACCTTCAGCACTCTTAATGTCAGTAAACAGAAACTATTGCTACCACATGAAAGATCGTACCCAAATTAGTAATTGACCACAGTTTGAAAGCAATGTTTCAAATTGCTGTCGAGTTATTGGCATTTTAAATGTAGAAAATACATGAAAGCGAGGCTGGAAAGGCGTAGTACGTTGTTTTTCTCATACAAATCTCTCTAATTTCAAATTGCTGTAACTTTACAGCCTTTTATGCTACAACACTCAAATTCTACAGAATCACCAATGTTGGTATGCTCGTTCGCATGGCAAGGATGTTGTTTCTGTAGCTAAACTGTTAAAATACAGAGACCACGCCGTTATGAATGAGGTGCTACCGTATGCCCGCTTTATGACACCACATTCTCAATTATATTTAACAATTGGCGTAAGTGTCTCCTGATTACATTCTATTTGTATAATAGTGTTTGCCTCCGCGGACGACAACCATCACGTCACGTGATCTATTTTAGCCAATGAGCATGCGCCAAAAGTTTGTGGTGAACTATAACACATAATAGTGAGTGGCTTAGCCAGCCAATCAGATTGTTAGAACACCAGTTGGTTTCTACTAAATAAATTATTATCATACAACTCAAATCATACTGATATTACGTGATTTAGTAACGATAGCTGTCACCAGCTGGAGCAGATTTCGTATGAGTGGGACAAACTACAGGACGGTTACCATACAGCGTGTCGTGACGTTAAAATGGTTTCCCATTGTTTTTGTCCTGCTGATCCAATCAAATTACAGTACAGCATGGCTGCAGCACGGTGACGGACATGCCATAGTTTGTCCCACTCGTACGAAATTTGCTCTATATCGTATTCTCGTCATTACTGCCTTGAAGTGGTATATAATTATTGTAATTGAATTTTAGGCTCTCTTCATTCAAGCTTTCAAATGACATCAGTAGAATCATGACAACTTTTAAAGGAGGACTGTAAGTCAAAATTAACTAGTTTAGCTCTACAAGTCAATGTAAACATAATTATATGAAAAGCCTTAGATTATAATTAACTTTGTTGTGTTGCATGTCAGAGAAAAGAAAGTGAACACTTTCCTCACAACCTCCACCAGTCTTGTAATTTGTGGTGTCAGATATGGGGAACAGTTAAGTTTTGTCATATTTACCCCGGCACGGACTGAATAGCTACAAATGTAAATAGTCTAAACTGCTTGTAATTGTGGGTCATTGTGTTTTCTTTTTGCTGGGGGTGATTGTTTTTCCTTGGTATACATGTGTAACAATCAATATGGGGAAATAGACCAGTTCGCGGTTAATTACAACATTTTGAAAGGGGTGCAAAAACAGTGTTTGCATGGGAATTCGATGCCAAATAATTTCCGTAAAATCAAATTCTGAAATATTCATTGTCTGCAACTTAAGATACCAGGTAAAAGATTAACTGAACACAATTTTTGGGATGTAGCTGTGCTGGGAAGCATGGAATCATATTTTCAGTTTTCCATTCATTTATCTGTAAAAACGAGTCTAAGTTCGCAGGAAAATTTACAATGTATGGAAAACTAAAAACATGATTGCACGCTTCCCAGCACAGCTACATCCCTCTAATATTGATCAGTTAATTCTTACCTGGTATCTTGCACTGTTTTCTTGTGCTGGGCCCAGTAACATTTGAAGGGTATAAATCACTATCCACTGTTAAAAGCTAATCTGGGGTTAAACTGTACAGATTACAAATTTAGCACTATCCAACGGATAGTTACCCTAATTCCTTTGAACAACTGGCCCCAGGGGCATAGCAAATAATACTGCTGAGAAAGAAGTGATTGTCAATACAATGACAGACCCCCAAAACCTGATCATGAAAATAGAATAAAAACAAAACCTGAATGTCTACACAGAATGAGTGGCTGTATCATATTTATTGTATTTTCTTCCCTCCCAACAGTCGCACAACAGCAGAGCACTCGCTTTCTGTGATGCTTTTTAACGAATCATAAAAAACAAAATTACACCTTAAAGTGCATAATTATGGGCCCTAGCCAGTTAGGGAGTTAAAGGTCAAAGTAAAGTGTAAAACAAAATTACCGAGATACACACAAACAAATATATTAACGTTTGCCATTTTCGTTTATAAAGTTATCAAATTCTAGTTCCTTAATGCTCAGTTTTTGTCAGCTCGACG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	Domain	Interproscan
PF00702	Hydrolase	haloacid dehalogenase-like hydrolase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000073	Domain	Alpha/beta hydrolase fold-1	Interproscan
IPR000639	Family	Epoxide hydrolase-like	Interproscan
IPR006439	Family	HAD hydrolase, subfamily IA	Interproscan
IPR011945	Domain	Predicted HAD-superfamily phosphatase, subfamily IA/Epoxide hydrolase, N-terminal	Interproscan
IPR023198	Homologous_superfamily	Phosphoglycolate phosphatase-like, domain 2	Interproscan
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43329	EPOXIDE HYDROLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000287	Molecular Function	magnesium ion binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005777	Cellular Component	peroxisome	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0042577	Molecular Function	lipid phosphatase activity	Interproscan
GO:0042632	Biological Process	cholesterol homeostasis	Interproscan
GO:0046839	Biological Process	phospholipid dephosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-