| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Acti_042522-T1 | PHD/F-BOX CONTAINING PROTEIN | ScLC4GM_1731 | 2029633 | 2068599 | - |
| CDS | |||||
| Acti_042522-T1 | |||||
| Transcript |
| Acti_042522-T1 |
| Protein |
| Acti_042522-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02008 | zf-CXXC | CXXC zinc finger domain | Domain | Interproscan |
| PF12937 | F-box-like | F-box-like | Domain | Interproscan |
| PF13621 | Cupin_8 | Cupin-like domain | Domain | Interproscan |
| PF16866 | PHD_4 | PHD-finger | Domain | Interproscan |
| PF17811 | JHD | Jumonji helical domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001810 | Domain | F-box domain | Interproscan |
| IPR002857 | Domain | Zinc finger, CXXC-type | Interproscan |
| IPR003347 | Domain | JmjC domain | Interproscan |
| IPR006553 | Repeat | Leucine-rich repeat, cysteine-containing subtype | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR019787 | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR041070 | Domain | Jumonji, helical domain | Interproscan |
| IPR041667 | Domain | Cupin-like domain 8 | Interproscan |
| IPR050690 | Family | JHDM1 Histone Demethylase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23123 | PHD/F-BOX CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003712 | Molecular Function | transcription coregulator activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0006482 | Biological Process | protein demethylation | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0032452 | Molecular Function | histone demethylase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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