Gene detail

Detailed information of Acti_041501-T2 in Actinernus sp. WN-2022 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Acti_041501-T2	EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7	ScLC4GM_1681	32984363	33020086	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Acti_041501-T2

GCGGTCATTAGCGTTGAAAATCGTCTAAACAAACCTGAGCTCCCTTCATGGAAGAGAACTTAAACCTATCAAAATTCAACTTATATCAAACTAGTAATGTCAGAAATACGTCGACCTTTGCCAAGGAGGAAAAGATCAAACTCGAGCAATTCATCTCGCATATCTAATGTATCATTCTCTGATGATGTTCGACGAGAAACCACAACAAAATTCGACAATTTTATGAAGGAGTGTCGATCGGCTTATCTGTCTGTATTGGCTACCACAAGTGAGAAAATCACCAGGAAAGAAGAACTTGCTCTTGCCTTGCAGTTTGGAGGTAGAAATCCATCCAAGAAAAGATTGCAAAAATATTGGAAAACAAACACAGATAGTATATCCTACAATGATTTCTGTGACATCATGCGAAAGGAGAAATCTACCTCCAAGGAGACATTACTGAAAGCATTCAAGAAAATTGACATCAATGGAGATGGTTATATTACATTTGATGAACTCTTCAAGATGTTGACTACACGAGGGGAGAGGATGACAAAATCAGAAGTACAGACCATCTTAGATGAAGCTGATTACAATGGTGATGGCAAACTGGATTATGATGAGTTTTGTAGCATGTTAATATCCACATCAGAGGAATGTGTACAAAAGAGCATGAAGACGTTAGGTTTGCCTGATAAAGACAGCACAAGGCCATCCTCTGCTTCAACCAATCACAAAGGGTCATTTAGTGAAAGCCGAAAAACAAGTAATGGGTTGAGTGTTGCTACAACAAAGAAAGATAAAGTGGGAATTACAATAGAAGAGCCTAAAAACCTAAAGACTTGGATGAATGTTCAAAGCAAAGGAAGCTTCTTTGCCGACCAGGACAGTGCTATTGCCAGTCATCATTTTAACCTTACTTTATTGAAAGACACCCAGCTATGGTTGACGATACAGCCAATACCTTCCAGATCAGCACCTGTGGACCTGCGTCTGGTGGACATGACTGTATTTCTGGTTGAGGACAAATCAGGAGAATTGGTAACATTTACAGAGGCTAAACTGGGCCAGAAATACTGCCTGCAATGCCAACTGAACAGGGGCAAATACCAACTTCTGACATTCACTTCTGGTTGTCGCGTGGCTGCCAGGAAATTTGAACCAACAATATGTGCTAAGCTGGTACAAGGGACTGGAGACAACGTAAAGCTTTCCCAGGCATTCAGGACTGTTCTTACAGAGATCTTCACGCGGTCTGACCTGGACAGTAATGGCTATCTTAGTCGCAAAGAGTTCGACTTGTTCCAGAGTAGAACGAGCGGTGAACCGTGCGATGACGATGCTTGGGAAGTAATGAAAGAACACTTTGAAATGAAAGAAGACGATGAGATCACGCTGAGAGGTTTTCTCGACCTTAACCTCATGGAGGCCAAGGATTCCGAGGGTGACCCCAATGACTTGTGGATAACCCTGGACAGTATGGGGTACAACAAGGCTCTAGAATTGGACCAGGCTTGCTCCTTCTTTCTGGACGTTTTTGTCAAGAATTGCACGCCGACTTTGACAGCGACATGCGCCGAGAGTGGAAATGAAGATCTGGTGAGAGCTGTGATGAATTCCGTTATGAGGAGCACCTCAACTAAGACAGAGAGCATCAAGGGAATGAAAGATCTCGTGTTGTATCGATATGAAAGCTCTGTACGGGTGACCATAGCAGTTGAAAATCAGTCTTACAGTAATGTCCTTCTGCGTGTCGACTGCAGTAAGAGCAGGAATTGTATAAGTCATCGCGATGAGCTGGACTACATCTTAGAAGTACAGTCAGGGAAACGAGAGGTGGCGCACCACATAGTGCCGGAGGATCCTCGAAAGGAATGGAATGTTAGACATGCGGTAACAATCGAGAAGTGAGAACATTAGAAAGAGTCAGGGATGTATATATCTTTCACAAATTCAGGCGAAACTTTAAAATACAGTCGGCTTAGGCTTTGTTCACACCAGCGACATAAGCACGAACACTAGTAACACACTTTCCACAAGTCGATCACAGCTTTGTTTTCATGCGAGCGAAGCGACTTTTTTTTATTCTGGCGACAGGCGAGCGACGAGCTCGCGAATCCAGCGCCAACCCAAATCGCAAAAAAAAAGCGGGCGGAGGAATAATATACGCAGACGGACTACCATATTTATCGGTCATAAAGGGACGCCTGTTAGCCATGTAACGACTAACCCTAGTGACAACCGGGTTTTTTTTTGGGGGGGGGGGGGGGGGGGACCCAGGTCACAATTGTAGCGAAACTGAAATTTGTCAAGTGTGAAATATGTATATACTTAGGTTTCTGAGACCAATGAATAAATAAAGTTATTGTATATAGATACGTGCCGAGTTTGACTTACGGAATTATTTATGAGAACGTACTACCTAAATTCACTTCGCCAATCAGAATCGCCGGCGAAACTTAGTGGTTAGCGTTTCTTCCAATTAGATTCAGCAACAGTTGAAATAACTGAGAATGCAACTGAGAATGCATTGGAGTCGTGCTCGTGGCTCGAAGCCTTGGCTACTCTTTTACAGTGACAGGACAAATTTAGCAAGAGTATTTGGAAAGTAGCATTTAGCCGAGCCAGCATTTATCGCATTTAGCAAGCATTTACCGCCTAGGGGCAGACTTCACCGTTTGCAACCTGAAATGTTATTGGTTACCCAAACCAATAGAAACCCTAACCCTAAAACAATGGGATTCTTTATCAGTGAAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR052266	Family	Mitochondrial Rho GTPase/EF-hand domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46819	EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0060170	Cellular Component	ciliary membrane	Interproscan
GO:0098797	Cellular Component	plasma membrane protein complex	Interproscan
GO:1903569	Biological Process	positive regulation of protein localization to ciliary membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-