Detailed information of Acti_041158-T1 in Actinernus sp. WN-2022 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Acti_041158-T1VDJ RECOMBINATION ACTIVATING PROTEIN 1 RAG1ScLC4GM_16812105760721060535+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12940RAG1Recombination-activation protein 1 (RAG1), recombinaseFamilyInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR024627FamilyV(D)J recombination-activating protein 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR11539VDJ RECOMBINATION ACTIVATING PROTEIN 1 RAG1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0002250Biological Processadaptive immune responseInterproscan
GO:0002331Biological Processpre-B cell allelic exclusionInterproscan
GO:0004519Molecular Functionendonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0033151Biological ProcessV(D)J recombinationInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0097519Cellular ComponentDNA recombinase complexInterproscan
GO:1905347Cellular Componentendodeoxyribonuclease complexInterproscan
GO:1990238Molecular Functiondouble-stranded DNA endonuclease activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP