Detailed information of Acti_041117-T1 in Actinernus sp. WN-2022 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Acti_041117-T1POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1ScLC4GM_16811910525219113970-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04857CAF1CAF1 family ribonucleaseFamilyInterproscan
PF13837Myb_DNA-bind_4Myb/SANT-like DNA-binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR006941FamilyRibonuclease CAF1Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR044822DomainMyb/SANT-like DNA-binding domain 4Interproscan
IPR051181FamilyCAF1 family poly(A)-specific ribonucleasesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15092POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0015030Cellular ComponentCajal bodyInterproscan
GO:0017069Molecular FunctionsnRNA bindingInterproscan
GO:0034472Biological ProcesssnRNA 3'-end processingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP