Detailed information of Acti_040753-T1 in Actinernus sp. WN-2022 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Acti_040753-T1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDScLC4GM_168163677946412565+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000293DomainChannel forming colicin, C-terminal cytotoxicInterproscan
IPR000998DomainMAM domainInterproscan
IPR001190DomainSRCR domainInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR050685FamilyLow-density lipoprotein receptorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24270LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0031640Biological Processkilling of cells of another organismInterproscan
GO:0050829Biological Processdefense response to Gram-negative bacteriumInterproscan
GO:0140911Molecular Functionpore-forming activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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