Gene detail

Detailed information of Acti_035293-T1 in Actinernus sp. WN-2022 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Acti_035293-T1	4-HYDROXYPHENYLPYRUVATE DIOXYGENASE	ScLC4GM_1591	143180683	143304457	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Acti_035293-T1

ATGGCAGCCTCATGGTACCAAACCCAAGCTCTTCTACTGCCAATGAGTTTGAATGTGGCTAAATGTAATTTAGGCAAAGTTAAAATTGAGACAATGCTGGGGTGTGTGGGGGCTAGGGCAGGGGTTCCTGAATTCCATGAGTATGGAGATACCACACATACATTTGTGGAGAGGAAGGACTACAATGGTATTTTTCTTCCGGGTTACAAGCCTCCTATGTACGAAGATAAACTGCTTCACAAACTGCCACCTGGCAATCTGAAGTTCATTGACCATATTGTTGGTAACCAACCAAATGATGCAATGACTCCAGTGGTTGAGTGGTATGAGAAAAGCCTTCAGTTCCACAGGTTCTGGTCCATAGATGACAGACAGATACATACACAGTACAGTGCTATGCGGTACATTGTTGTCACTAACTATGATGAAACAGTCAAGATGCCCATCAATGAACCAGCTCCAGGAAAGAAAAAGAGCCAGATTCAGGAATATATTGATTACTATGGATCTGCTGGAGTGCAACACATTGCTCTGAACACCACTGATATCATTTCAGCTATCACAAATCTGAAAGAAAGAGGCATGGTATTTCTCTCAATCCCTGACAAGTACTACGATAATCTCAGGGAGCGACTGAAGACTGCTCATATCAAAGTGACAGAGTCTCTGGATGTGATTCAAAAGTTGAACATCCTGATAGACTTTGATGACAAGGGTTACCTACTGCAAATCTTCACTAAGCCAGTTCAGGACAGACCAACTCTATTCCTAGAGGTTATCCAGAGGCACAATCACACGGGCTTCGGAGCTGGAAACTTCAAGGCTCTCTTTGAATCTATCGAGGTAGATCAGGATGAGCGAGGCAACTTAGATTAACATTACCACGGTGTCCCGTTGGCCTCGGAGAGATCAGCGATAAACAGTTAGACAAGCAACCAGGGCACAGCAACAATGAATAATAACAAGGAAAAGCTTTGGAAAATGTGGTTGGCCCAGAGGAATGGAAGTTTCGAGTGGGAAATTTAGGAGAACAAGGAATAGTTGTTAAAACGTGATCTCGTGCGAGTGTTTCCACAGTTACTCCTTGTTCTCTTAAACTTTCACCGACATTCTAAAAAACATTTATTTCCTTTTATGACAAACTCAAAAATGACTTTTTTTCAAAACCGAGTATGTAAATTCTACTTTAGCGCGCGATCGATTAAAGGACTGTTCGTTTATTACGTTGTATGGGCGGTGGGTTTTCAGAAAACGTGGCGAAAAATATACTTACCCCATGTCGGTAGTCTCCTTAGCAGCCGTTTTTAGGGTCCACGCAAACGCTTGCTTTTTACACCAGCCTAACCTAAGTATCAGTTTAGCTTGTTAGCTAATTTATGGATGGAAGGAAGCTGGAGAAAAACCCTCGGAGCAAGAGCGTGATAATATGGCACCATGCGCCACCCCGACTCAAAGAAATACTGTAACTATTCATGATATGAGTTAAATAGCAACGGTTCGCTTATGTCGGCACTTTCAAGGTCATCAGTACAGCGTCAAAACAAACGATTTCTTCTGAACACTATCTACTTTCTTGAGAAAAACTAAGAACAGAATATATACGAAGCTATTTGAACCGATTTCATATCAAATTTTTCAAATTTATCCTCTATATTTGTTTTCCTAGATTTCCCGCCAGAATGTTCTGGCGAGAGTGGTTTTTGGATTCTGAGATCTGATTGCCCATGCGGTTGGAATGGAATGTCTGGCTGGTGTAAGCAGCCGTTAGTGGGGCTAGCGTTTGCGTGACGACCCTAAGAACGGCTGCGAAGGTGACTAACGTCCAAGTGACTAGGTTTGAAATGCTTACCCCACTTTCAGTTAAAAGTCTAGACACTAGTCCCAAGGATCGGACAGCGCCAGGTTACTTTTCCGTTTCAACATGGCGTCGAAGCGCACCGGCTCGTGAGAAGATCTGAAGTGAGACAAAAACCTGTGAAGGAAAATACGTTCGAACGTTCCTGCAATTTCTTGCGCAAATTGCCGTGCTCCTTAGCTAGAATCGTCCTTCACATTCTAACATTCTAAAAGCATTCGATAAAAAACCTCGCCATGTTTTAAATTATGAAAAACCCTCCCCATAACCCCCCCTCCCCCGCGACGTATAGACAAACAATCCCTAAAAGTGCATATATGGTCAATTTTTTTTGGTGTTATTGCATTTGCAGTTCTATAATGGATGTTTACTGCTGTAATACTAATGGAGAAAAAAAACATTCAATAACAAGAGGCTGCGTGCAGCCTGAACTCGGGCTGTATACATGTATGTTTGTTTGGAAAGTTGAAATGAAGTACGAGCCACCTGGAAATCAGGAAAAGGTGGTCGTAACTAGAGCTGGTCACTTATTACAATTAATTCTTGCAAGTGATCACCCACGGAATCGGAGTAGTTGGCCGCTTAAGAGAGCTTGCACACACCACGCCCACGAGAATACGTATACAGTGTGACTGATATCACAGTATACAGTATTACTGTACTATAACAGCACGAATGTCCTGAATCTACAGTGCACGCATTGGTCAATATACATTAATCGATACAGTGTTTACGTTGCATACAAAAAGAAAACGTACAAAATGTATTATGACTCTGGGGTGGTCGTTTACGAGAGCTTAAAAACATAACAAATATAATTCTCAACCCCCAAAGGTGGTCGCGGTCGCTTACGGGAGCTTCTAATTACAGAGTTTTGCTGATAATTAAAACGGGGTTTCATGAGGGTGGTCGCTGAAGGGACTGGTCAGAAATTAGCAGGGGGATGGGAGTTGAGAAAGGGAGAGGGTAATATTTTTTAAGTAATGGTCCAGATAAGAACTGTAGTGTCTACGGCAAGGAATGTTAAAAGGTGTTAATTTTCTATTATTCTTTCTCGTAATTTCATTGGTTGATACTTATAAATTCAATAGAAACCCATCAAAATAATGCATTTTCATTCGATATTATTTTGTGGTTTGAATTTATTTTGATCAAACTAACTATGGTTTAATTTTGAAGAATATCGTGTGTGGGGAAAGTTCTCAAATTTGCGATTGAAAAATCCTTTGTTTTCTCTATATCTGATAGGCTGGATGGTGGCTTCTCTGCGTTTTCACAGAAAAAGAGCCAATAGCATAAACAAATACTTTATTTTCGAGACGTAGTTTGGAAGGTAGATACCTCCTAAAGCACTTAAGGCATATTCAAGCAAAATCGCATGTGGGGGAGTCTCATTGCCGCAGAACAATGGATTCTACTACAGTTCTTATCTGGACCATTACTTAACCCCAAAACGAGGGTCATAAAACATTGGGCAACTGAAAAAGGCGTGGTTATTTGTCTAGGTTTTAGAGTATTTTATTTTTTCTCTACCCTGCATCCCCCTGCATCTCTCCTGCTAATTTTTGACCAGTCCCTAATGTTTAATAAAATATTGGTTGCATTGATTTCATGCATGTAGATACCTTGGAAAATTTAATTAACTTCATTTAAATAGGGGAACACTAATTACAGATACATATATTTTTATTAGCTCCTTGCACAACGAATGGTACATTGGAATATAGCGCTAATAAAATATATTTTGTGGCAACATTAACATTTAGATACTAAATCGATCAAATTGATGATTTTAAGATCATGCTCTCATAGACATACTTTGCTGCAAAACGAGCATGGGTGGATTTATGACCAAATTAAATAACTGGTCATCAGACATAAATTGTATTGTATTTTGTATTAATTTTGAGGGTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00903	Glyoxalase	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004360	Domain	Glyoxalase/fosfomycin resistance/dioxygenase domain	Interproscan
IPR005956	Family	4-hydroxyphenylpyruvate dioxygenase	Interproscan
IPR029068	Homologous_superfamily	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	Interproscan
IPR037523	Domain	Vicinal oxygen chelate (VOC) domain	Interproscan
IPR041735	Domain	4-hydroxyphenylpyruvate dioxygenase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11959	4-HYDROXYPHENYLPYRUVATE DIOXYGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000139	Cellular Component	Golgi membrane	Interproscan
GO:0003868	Molecular Function	4-hydroxyphenylpyruvate dioxygenase activity	Interproscan
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006572	Biological Process	tyrosine catabolic process	Interproscan
GO:0009072	Biological Process	aromatic amino acid metabolic process	Interproscan
GO:0016701	Molecular Function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-