| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Acti_031143-T1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN | ScLC4GM_1591 | 27409911 | 27457060 | - |
| CDS | |||||
| Acti_031143-T1 | |||||
| Transcript |
| Acti_031143-T1 |
| Protein |
| Acti_031143-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00096 | zf-C2H2 | Zinc finger, C2H2 type | Domain | Interproscan |
| PF00249 | Myb_DNA-binding | Myb-like DNA-binding domain | Domain | Interproscan |
| PF01426 | BAH | BAH domain | Domain | Interproscan |
| PF01448 | ELM2 | ELM2 domain | Family | Interproscan |
| PF17226 | MTA_R1 | MTA R1 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000949 | Domain | ELM2 domain | Interproscan |
| IPR001005 | Domain | SANT/Myb domain | Interproscan |
| IPR001025 | Domain | Bromo adjacent homology (BAH) domain | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR013087 | Domain | Zinc finger C2H2-type | Interproscan |
| IPR017884 | Domain | SANT domain | Interproscan |
| IPR035170 | Domain | Metastasis-associated protein MTA1, R1 domain | Interproscan |
| IPR036236 | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| IPR040138 | Family | Mesoderm induction early response protein/metastasis-associated protein | Interproscan |
| IPR043151 | Homologous_superfamily | Bromo adjacent homology (BAH) domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10865 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000122 | Biological Process | negative regulation of transcription by RNA polymerase II | Interproscan |
| GO:0003682 | Molecular Function | chromatin binding | Interproscan |
| GO:0003713 | Molecular Function | transcription coactivator activity | Interproscan |
| GO:0003714 | Molecular Function | transcription corepressor activity | Interproscan |
| GO:0005654 | Cellular Component | nucleoplasm | Interproscan |
| GO:0016575 | Biological Process | obsolete histone deacetylation | Interproscan |
| GO:0016581 | Cellular Component | NuRD complex | Interproscan |
| GO:0042826 | Molecular Function | histone deacetylase binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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