| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Acti_028184-T1 | METALLOPROTEASE M41 FTSH | ScLC4GM_1461 | 32015 | 35214 | + |
| CDS | |||||
| Acti_028184-T1 | |||||
| Transcript |
| Acti_028184-T1 |
| Protein |
| Acti_028184-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | Domain | Interproscan |
| PF01434 | Peptidase_M41 | Peptidase family M41 | Domain | Interproscan |
| PF16576 | HlyD_D23 | Barrel-sandwich domain of CusB or HlyD membrane-fusion | Domain | Interproscan |
| PF17862 | AAA_lid_3 | AAA+ lid domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000642 | Domain | Peptidase M41 | Interproscan |
| IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
| IPR003959 | Domain | ATPase, AAA-type, core | Interproscan |
| IPR003960 | Conserved_site | ATPase, AAA-type, conserved site | Interproscan |
| IPR005936 | Family | ATP-dependent zinc metalloprotease, FtsH | Interproscan |
| IPR006143 | Family | RND efflux pump, membrane fusion protein | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR032317 | Domain | RND efflux pump, membrane fusion protein, barrel-sandwich domain | Interproscan |
| IPR037219 | Homologous_superfamily | Peptidase M41-like | Interproscan |
| IPR041569 | Domain | AAA ATPase, AAA+ lid domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23076 | METALLOPROTEASE M41 FTSH | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004176 | Molecular Function | ATP-dependent peptidase activity | Interproscan |
| GO:0004222 | Molecular Function | metalloendopeptidase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0022857 | Molecular Function | transmembrane transporter activity | Interproscan |
| GO:0030163 | Biological Process | protein catabolic process | Interproscan |
| GO:0055085 | Biological Process | transmembrane transport | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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