Gene detail

Detailed information of Acti_026859-T1 in Actinernus sp. WN-2022 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Acti_026859-T1	FE2OG DIOXYGENASE DOMAIN-CONTAINING PROTEIN	ScLC4GM_1370	6457557	6470453	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Acti_026859-T1

GATTCGATCACTGCACTTTTAATAATTCCGACGAAGGAACTGCAGTATCCAGCTGAAAATGAGTAGTAAATTGCTCGTTGTCTTCCTGTTTCTCTGTACTGTGTCTTGGAATGAAGCAGAAAAGGCTGCAGTGAAAGGCAAGAACCGAGCTTTGGTCAATAAGTTCGAGGACGATGGAAAGTTTGTTTTCGTGTTCGATAAGTTGTTTCCACGACAAGTACTTTCGGCATGTCTTCAAATGATATCACAAGGGAAAATAGAGGGAATGCTATCGCCGTGGCAGTATGCCTATAAGGATTACTATTTTAACATCCAAGTCGCGAATTCCACGAACAATTTGCCGTGGATAACACCAATGAGTCCCGATCTGTTGATGAAGACTGCTGTTTGGGAAAAGATAAATAAAGTTGCTAAAGCCGTTTCTGGAGGAAAAGTGTATTATCCATATCATATTACGTCTTCCATGGTCAAAAGACTGGATTTTATTACAGTGGATACAGTTGAAGATGCAGATAATGATGAGTTAATCTTTAAAGTGTTTCTCACACCTAACATAAAGAAGAATGACTATGGAGAGGTATTGTTCTACAAACAAAATGGAGAGATCTTAGGAGCTGTGTTTCCAAAGTTGGGTCGTTTACTGGTGTGGAATGCTTCTGTGCCTTTCATATACAAGCCACCTGCCATGTCATTCAGGCAGGGCCTATATGACATCACTGTAAGACTTACTACATCAAAAGAAAAGTTTGAATTGGGGACAAAGAAGAGTAAGGAATATATAGAAGAAGATGCTATATATGAAAAAATGGACTTTCCTCTCACAGATGGCATGCCATTGCCTGATATGGATTTTGAAAAACATCTAACAAGGAAATTCCATGACAGAAAGGGTCGAGTTGTCGCATACTTTGATGGATTGGTAGCTAAAGGTGATCTGGATGCACTGCGATTATTTCTGCTACATTATAACAGTGCCTATGCCTACCAAGGATATGACGAGAGTGCTGACACTGAGCATGATAATGTGTCTTGGATTGCTGGTATTAAGGTGGCGAAATTTGTCAAAAGTCGTCTATGGCAAATAATTCAATCTGCTGTGGAATACTTGAGTGGAGGAAACAAGGGATGGTACCCTTATGATGTGTCTATGAACATCGTCAGAAATTCACACTATACAAGAATCCATGAGGACTGTGAAGAAGATGAGTACGAGTTCACTATCCTTCTGTACTTAACACCAGAGTGGGATGAAGAGAAGTATGGTGAGACAGTATTCTTCAACGAAGTCATGCAGCCCAATGGCAGGCCATTCAGAAAGGGCCATCAGCAGTACAACTGGGTTGCATCTGTGAAGCCTGTCTATGGTCGTTTGGTCGTATTCAGGGGCATTATACCTCACTCAGCCAGACCCCCCAGCCCTGGGTTCAAGGGGGCTAGATACACCTTTGCATGTAAGGTATCAAGGACGTACCACATTGCACACGCTAAGATGCTCCGTGAATCCATTGAGGATGTAGAGCCTGGGCACCCAGATGCCAAGCTCATGGAGGATCTGACATATAAACTGTACGATATACCAACACCAGAGAGACCTACGGAATTCTTGGAGAAAGAATTAGCCAAGAGGAGAAAGGAGAAGGCCGATAGTCAGAAACAAGAAAAAATGTCGATTTTGGATGAGGTGATAACAAATGTTTCCTAAGGCAGATAACGTCTACAATAGTATAATTCACCTGCCGTTTCTTCTGTCCAGCTTACGCTTGTGCGTATGTCTCCGTTTCTTGAGTTTCACAAGTACGTAACGTTCCTTATGCTTCCGTTTCTGCTTTCGTCGCTAGTGAAAACCATCCTTAACCGTGCAGAGGTTACGAAGAAGTGAACTCACACTCGTATTTAATTAAATCTCATTTTAAGCCACTTAAATAATTTTGGAGTTTGAGTTGGGAAGTCGGAAACCGGTCAGATTTTTTTCTGGATCCGCGCCTGGGAGGGTATCATTCAACCTAAAATCAGCATCTAAGAGGTGCGGTTAACTGTTGCAATTGTTTCCTGGTGACATTTCAGACACAGACTTCCAAGCCCTAGGGTTCTCGATGTCAAATAGAAGTGATGGCAGACAAGTAATATTTAAAGTGCCCCTACGATCAAATTTTGACATATCAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13640	2OG-FeII_Oxy_3	2OG-Fe(II) oxygenase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006620	Domain	Prolyl 4-hydroxylase, alpha subunit	Interproscan
IPR044862	Domain	Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35169	FE2OG DIOXYGENASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0031418	Molecular Function	L-ascorbic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-