Detailed information of Acti_022167-T1 in Actinernus sp. WN-2022 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Acti_022167-T1PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATEDScLC4GM_9385776354257817567+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF21219USH1C_NHarmonin, N-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001478DomainPDZ domainInterproscan
IPR030237DomainHarmonin, N-terminalInterproscan
IPR033028DomainWhirlin, harmonin_N-like domain 2Interproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR051844FamilySensory Perception USH2 Complex ProteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23116PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP