Detailed information of Acti_018898-T1 in Actinernus sp. WN-2022 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Acti_018898-T1REGULATOR OF SIGMA-E PROTEASE RSEPScLC4GM_7074726853+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01103Omp85Omp85 superfamily domainDomainInterproscan
PF02163Peptidase_M50Peptidase family M50FamilyInterproscan
PF07244POTRASurface antigen variable number repeatDomainInterproscan
PF17820PDZ_6PDZ domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000184DomainBacterial surface antigen (D15)Interproscan
IPR001478DomainPDZ domainInterproscan
IPR004387FamilyPeptidase M50, putative membrane-associated zinc metallopeptidaseInterproscan
IPR005632FamilyChaperone protein SkpInterproscan
IPR008915DomainPeptidase M50Interproscan
IPR010827DomainPOTRA domain, BamA/TamA-likeInterproscan
IPR023707FamilyOuter membrane protein assembly factor BamAInterproscan
IPR024930Homologous_superfamilySkp domain superfamilyInterproscan
IPR034746DomainPOTRA domainInterproscan
IPR035919Homologous_superfamilyEAL domain superfamilyInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR041489DomainPDZ domain 6Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR42837REGULATOR OF SIGMA-E PROTEASE RSEPInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0019867Cellular Componentouter membraneInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0071709Biological Processmembrane assemblyInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP