Gene detail

Detailed information of Acti_017800-T1 in Actinernus sp. WN-2022 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Acti_017800-T1	QUINONE OXIDOREDUCTASE PIG3-RELATED	ScLC4GM_612	482863	492893	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Acti_017800-T1

CAGGTTCATATGCTGAGTTCAGTAATGTACCAGCCTGGCGTATCATCAAACCTCCAGTAAATGTGACGTTGGAGCAGGCAGGCAGCACCTTGTGGCAGGGTCTGACGGCATACTGCTTTATCAACTATGTTTTCCCTGTTCAAGCTGGTCACAAGGTACTCATTCAGGGTATTGCTGGTGGTGTTGGGACACTTCTTTGTCAGATGGCTAAACTTAGAGGTGCATATGTGATTGGTACTTGTAGCACTGAAGCAAAAGCAGCCAGGGCTAAGTCCCTGGGTGCAGATGAAGTGATTCTGTACTCACAGAAAGACTTTGCAGAGGAGACCAAACGCCTCACTGATGGAAAAGGAGTCAATGTCATTTATGATGGAGTGGGCAAAACAACATTCTTGAAAGGTTTTGATTGCTTGGCTCCAAAAGGTACCATGGTCCTGTACGGTGGAGCCTCAGGGCCAGCTGACCCCATTGACCCGGCAATGTTAGCTAAAGGGTCCTTTTTCCTGACATTTGCCTCTCACGTCGCGTACACCGGTGTTCCCGATGACTACAGGAAAATGGCAACTGAATTGTTCGAATGGGTTGGAGATGGGAAGCTAAAGTTTGGATCAATCGAAAAGTTACCTCTATCAAAGGCTAAGGAAGCTCATGACAACTTGCAGGGCAGAAAGACGGCAGGGAAAGTCCTCCTCCAGCCTTGAAGGGGCGCTGTCAACTGAAAATCATAAACTTTTAATGACGAAAGACAAAAAGAACTACTCTGATTAGCAGAGTATACTTTACATGTATACTGGAGAAAATTTGAGGCAATTTTGATGAAGGTGACAAAGTTTCGTTATCAGGACATTCACATGGTATTTCTCTTCGATGTACGGGTGTTATTTTTGTAGTTTTGTTTTAGAGAAATTTCTAGGTTCGAGATGGATTCACCGTACCCGTTTATAGGCCTCGGCCAGGGACAGTACTGAGACACTAGTAATAGCAGTTCATGTGCTAAAATCATGTGGAGGCATTACACCCGACCCCTGAAAAATGCTTGCCCGACGAAAAGAAGTTATTTTCTTGGTTGTGGAAGGTTTTCTGAACTTTCCTTTTAATCAAAGTGCAAAGCAACAATCGGACATGATAGCGATACTTTGTGTTGATATACATTACGATTGTTATGCTAATGTACAACCATGATTTGAAAAGGCCGCTTTGTGTAAGGAACCAATAGATCTCTGGTTGGAACATTAATGACAATGGATGACGTGCAGTAAGTATCGCTTTTGAGGGAATCGGCTAACAATGTTGCTTCCCAATTCAGATCATGTGACGTGACCAAATGCTACTCTGGGGAATTGTTCATTTTTCATTCTAATCGTGATGCAGTCATGCTTATCTGAATAAAATTGATTTTCAAAGAAACTGTAAAGAAGAAAGTTCTGCGTTTCGCGTTGTGCACCTTCTCTCTGAATGTTTAACATAAGAACGAGGCTGTATAAATGAGTCTGTAGTCATCGCATTCGAAACTGCGACTGTTGGGTAGCAACTGAGTTAGCCGATTCTCTCTCTTGTTAAGACACTCGACAAAAATAATTATATGAGAAGAAAAAAATACTGGGCACAAAGTTAAAACAACTTGGCCCGGTGGTTGGAAGCAAGGATAACTTTATCCCTAGGATAGCGCTAAATATGAATTATAATCTGTACAGTTTACCCTCGTGTCAGCGATTTACCTCTGGGGTAGCGCTTAACCCGTGCTTCGATCAACCGGGCCCTAAAGCTTCCCAAACCCCTTCCCCATTTCAATGTTGGTAATGTATGAATTTCAGATTGAACGTGCACCTAAACCAACATTGTAAGGGGAGAGGGGGTTTACTTAAAGGAGCTGTGTCGCGGTGAGGGACACGCCTTTATGTTCCGGGCTGGAACAACATTATTTTCAGTACTGACTCTCCTAGCACAGGTGGGATGGTGAAATGTGCAAAAATGATCAACAAACTGTGCGTAGATCTAGTGTTCAAGGAAAATATTGCATATCCTTTCGATCAAGCATTAAGGCTGGACTGTTTGAAGCCAAATAACAGCCACCAATCGAACGCTGATTCCAGACATGCGCAACACAGCGCTTTAAAGCGATCAGCCATTTTGTCTGTGATTGTAGCTAGTGTGTATTTGTTTCTTCTGTAGATCAGCGTCGGCGGTGAAGTTCTAAACACTCAAGGTTACACATTTCAGCTGCATCTAGCCTCCCACGGCGGTTCGTATTCCTTTATTAACCCTTACTAGCTGAACGGATATTATTTCCCCTGACGTATCAGAGCGCAAACAGCTTTTCAGTCGCTCCAGGCTCTTTTATCATAACTGCACGATCATTTCACCGCCGTTTCTATTAGATTGAGTTGAATACCGGCGGAGGTATCGTGTTAACACACTCATGTTTATTTAGTTATTTATTAGTTAAAGTGCCCCTAACTCCAATTTAGTTTTATTTATTTTCAAAGATTATATGAAAACTGAGGACGAATGAAACAGAAGAAAATGAAATCGGTGTAATCGAATGATTCTTAAATCGTGATTAAAGTCCCGGGAATTTTGTTTACGACCACGCAGTTTGGGGTCTTCGTCGAGTGACGTAAGACGAGGCAGAAAGCCTTGTTGACTTTTCGTAGTTTCTGTTGTGGAGTCTCGTGTACTAGACCCATGCTTCTAATTATTGTACTGTCGCTCGGTAGTGAAAAGAGCCGGGTCGCTTTTCGCCTTTTTTAACCAACTTGAACAGGTCGTAGATAATCCAGTATACATGAAAAAATACCCTAAATAGTATGAGGATTTAAATAAATAAAAATGGTAGACACATC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00107	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013149	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR020843	Domain	Polyketide synthase, enoylreductase domain	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR047618	Family	Quinone oxidoreductase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48106	QUINONE OXIDOREDUCTASE PIG3-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003960	Molecular Function	NADPH:quinone reductase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016651	Molecular Function	oxidoreductase activity, acting on NAD(P)H	Interproscan
GO:0017091	Molecular Function	mRNA 3'-UTR AU-rich region binding	Interproscan
GO:0070402	Molecular Function	NADPH binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-