Detailed information of Acti_011738-T1 in Actinernus sp. WN-2022 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Acti_011738-T1COLLAGEN ALPHAScLC4GM_5789078939090831825+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00182Glyco_hydro_19Chitinase class IDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000726DomainGlycoside hydrolase, family 19, catalyticInterproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR023346Homologous_superfamilyLysozyme-like domain superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004568Molecular Functionchitinase activityInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0006032Biological Processchitin catabolic processInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016998Biological Processcell wall macromolecule catabolic processInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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