Gene detail

Detailed information of Acti_009543-T1 in Actinernus sp. WN-2022 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Acti_009543-T1	HISTIDINOL-PHOSPHATE AMINOTRANSFERASE-RELATED	ScLC4GM_578	37627767	37637995	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Acti_009543-T1

TGGTGGCTCGAAAATGGCGGCTGTTGGTGACGAGAAGAAGGAGCCTTTAAACTTAGAAAGGCTCGTTAGGCCGAATATTCTAAATCTTGTTCCATATCGATGCGCTAGAGACGACTTTAGTGAAGGAGTCCTCTTGGATGCAAATGAGTGCTCCTATGGGTCCAGTATTCCTGTAGATGGAGATATGAACAGATACCCATGTCCCTACCAATTCGAGTTAAAGCAGATGATTGCTGACTTCAGAGGTGTTCAAAAGGAGCACATCTTCACAGGTGTTGGCAGTGATGAGGCTATTGATATGATAGTTAGGGTGTTTTGTAAACCTGGCAGGGACAGTATCTTGATTACTCCACCTACCTATGGCATGTACAAGGTTGTGGCTAACATCAATGATGTAAATGTCATAGATGTACCACTCACGGGGGATTTTGAGCTTCGAGTTCAGGAGATCTTAAAAGCCATCACTCCAACTACACATGTGATCTTCCTCTGCTCTCCTAACAACCCAACTGGCAATAACATTGGCACAGAGGATGTTGTTGCTCTACTTGATAGTTTCTATCAAGGCATTGTTGTAGTTGACGAGGCCTATGTGGACTTCAGCGAGAAGCCAAGTCTGTGTTACCTGCTGAAGAAGTACCCAAGACTTATCATCTTGCAGACATTATCAAAATCTTTTGGACTGGCAGGAATAAGATTTGGTGTGGCTATTGCACATTCAGACATCATCTCCATCTTCAACAAAGTCAAATTCCCATACAACATCAATAAGCTAACATCAAAAGTGGCAGAGGAGGCCTATTCCAAGGTGCATCTGATGAAAAAGATTGTTGAGAAGATACAAGAGCAGAAGAAAAGAGTTGTGGGTGAGCTTGGAAAATTTCCGTCCGTTAGAAAAATTTTTCCATCGGATTCCAACTTCCTTCTTGTAAGGATAGACCATGCCCTTGAAACCTACAAAGCCTTGGCAGATCAAGGGGTTATCGTGCGTTACCGTGGTAACCAACCTCATTGCCAGGACTGTCTCAGGATCACTATAGGAACTCCCGAGGAGAACAACGCCCTTCTCAATGCTCTCAGAATTGTTGTTGGAAAATTCCAATCTTGAAATTTATTTATTTTACTTCTTACATGTAAGTCATTTAGGTAGCAGTTTTACACACACCTCCCCTATCTCACCAAGTAATCGCCGAAAATTTAGCCTAAAACATACAGAAATGAAGCCAATCAAGTCTTGAAGTATCATTACTTGGACCAGCGGTTTACCGCTGGAATCGATCTGGATCTGGAATGGAAAAACCAAAGTTTATCTCGTTTAGCCATAATGGTTTTCAAATCTCTGAATCAGCTAGCTCCTGAATATCTCTGTTGGAAGTTCATTCCTAGGACTGAACTTACAAATTATGTCCTTAGGGATATATCTGATCCCGAGTATCTGATAAACTCGCTGTTCCACACCCCAGCACCAATTATTGCAAACGCAGCTTTAGCTACCGCGGTCAGCGGTCTTATGGAACAGCTTGCCTTCCGAATTACGTGCACAGAAATCCCTAAATGCATTTAAATCCAAGCTAATTTGTCACGATTTCGCAGGATTTTACGTAAAGGATCAAAACCAAGGGTGAGGTCTTTCATGTTAAAAATATAGACCTGTCCTTGGTTTTGAATTCAGCCCCGCTCTCCCTTTGCTATTCAAATCAGGTCTTCCCATGAGGATCAAAACCTGCATAGAACAATGGCATTATGCGTGCCTAGTTATTAATGTTAGTTAAGATAACAACACGGCGCTCATGGAAAGCATGTTTCTTTATTTAATATTTCCTTATATTTTATCATTTTAATAATTGTAATTAAACATGTTTACATATTAGTTGGTCACATATATAACTTGTAAGATAGATTAGTAATAGCATTAATAGCATATTTTAATATTTGTATATTACCTGATCGAGCATACCGTGTATAAATAAAGTTGACTTGACTTGAGT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00155	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001917	Binding_site	Aminotransferase, class-II, pyridoxal-phosphate binding site	Interproscan
IPR004839	Domain	Aminotransferase, class I/classII	Interproscan
IPR005861	Family	Histidinol-phosphate aminotransferase family	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42885	HISTIDINOL-PHOSPHATE AMINOTRANSFERASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000105	Biological Process	L-histidine biosynthetic process	Interproscan
GO:0004400	Molecular Function	histidinol-phosphate transaminase activity	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0016740	Molecular Function	transferase activity	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-