Detailed information of Acti_006441-T1 in Actinernus sp. WN-2022 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Acti_006441-T1DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIALScLC4GM_17410392731044707+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF01136Peptidase_U32Peptidase family U32FamilyInterproscan
PF16325Peptidase_U32_CPeptidase family U32 C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR001539FamilyPeptidase U32Interproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032525DomainPeptidase family U32, C-terminalInterproscan
IPR050547FamilyDEAD box ATP-dependent RNA helicasesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR47963DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIALInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0009409Biological Processresponse to coldInterproscan
GO:0033592Molecular FunctionRNA strand annealing activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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