Detailed information of Acti_006421-T1 in Actinernus sp. WN-2022 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Acti_006421-T1ALANYL-TRNA SYNTHETASEScLC4GM_174966755972418+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01411tRNA-synt_2ctRNA synthetases class II (A)FamilyInterproscan
PF01565FAD_binding_4FAD binding domain DomainInterproscan
PF02272DHHA1DHHA1 domainFamilyInterproscan
PF02913FAD-oxidase_CFAD linked oxidases, C-terminal domainDomainInterproscan
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan
PF11614FixG_CIG-like fold at C-terminal of FixG, putative oxidoreductaseDomainInterproscan
PF13746Fer4_184Fe-4S dicluster domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002318FamilyAlanine-tRNA ligase, class IIcInterproscan
IPR003156DomainDHHA1 domainInterproscan
IPR004113DomainFAD-binding oxidoreductase/transferase, type 4, C-terminalInterproscan
IPR006094DomainFAD linked oxidase, N-terminalInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR016164Homologous_superfamilyFAD-linked oxidase-like, C-terminalInterproscan
IPR016166DomainFAD-binding domain, PCMH-typeInterproscan
IPR016169Homologous_superfamilyFAD-binding, type PCMH, subdomain 2Interproscan
IPR016171Homologous_superfamilyVanillyl-alcohol oxidase, C-terminal subdomain 2Interproscan
IPR017896Domain4Fe-4S ferredoxin-type, iron-sulphur binding domainInterproscan
IPR017900Conserved_site4Fe-4S ferredoxin, iron-sulphur binding, conserved siteInterproscan
IPR018162Homologous_superfamilyAlanine-tRNA ligase, class IIc, anti-codon-binding domain superfamilyInterproscan
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR018164DomainAlanyl-tRNA synthetase, class IIc, N-terminalInterproscan
IPR018165DomainAlanyl-tRNA synthetase, class IIc, core domainInterproscan
IPR023033FamilyAlanine-tRNA ligase, eukaryota/bacteriaInterproscan
IPR032879DomainFixG, C-terminal immunoglobulin-like domainInterproscan
IPR036318Homologous_superfamilyFAD-binding, type PCMH-like superfamilyInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR050058FamilyAlanine--tRNA ligaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11777ALANYL-TRNA SYNTHETASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0004813Molecular Functionalanine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006419Biological Processalanyl-tRNA aminoacylationInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0071949Molecular FunctionFAD bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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