Gene detail

Detailed information of Acti_006362-T1 in Actinernus sp. WN-2022 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Acti_006362-T1	TUNGSTEN-CONTAINING FORMYLMETHANOFURAN DEHYDROGENASE 2 SUBUNIT B	ScLC4GM_174	708495	712189	+

Gene Structure

More details in Jbrowse Sequence

CDS

Acti_006362-T1

ATGAGCGAGATTAAGATTGAGGAGAGAGAAGAATTTAGTATTACTACTTGTCCTGAAAATATTGAAATAGATACAACCCTACCACAGTTTGAGGATAGGGATAATCAAGAGACAAAATATAGCACTTGTTATATGTGTGCTTGTCGTTGTGGAATTAAGGTAACGCTGGAAAATAAGAAAGTGCGTTTTATTCAAGGTAATCGCAATCACCCTGTCAATAAAGGGGTTTTGTGCGCCAAGGGTAATGCTGGGATTATGAAGCAAGAGAGTATGGCTAAATTAACTTCGCCATTACGCAGAAAACCTGGCACTGAACGCGGTGCTGGTGAGTTTGAAGAAATTAGTTGGGACGAGGCGTTAAATGAATTAGAAACTCGACTTCGTAAAATACGCGCTACTGACCCTAAAAAATTGGCGTTTTTTACAGGGCGTGATCAAATGCAAGCCTTAACAGGAATGTGGGCACAGCAGTTTGGTACTATCAATTGGGCTGCTCACGGCGGATTTTGTTCGGTGAATATGGCAGCAGCAGGGCTTTATATGTTGGGACAATCGTTTTGGGAATTTGGCGATCCTGATTGGGATAATGCCAAATACTTTATGCTTTGGGGTGTTGCTGAAGACCACGCTTCAAACCCTATCAAAATTGGACTTGGCAAGCTTAAAAAGAATGGTGCAAAATTTGTGTCGGTTAATCCAGTTCGCACAGGTTATCAAGCAATTGCTGATGAATGGATTGGTATTTGTCCGGGAACTGATGGGGCATTTGCTTTGGCGATGGCACAAGTTTTGATTAAAAATGATCAGTATGACAAAGAATTTTTGATTCGCTACACTAACGCTCCGCAACTGGTTATTAGCAATCCTGGTAAGTCAAATGATGGGCTATTGTATCGCAATGATGATGGCAATCCTGTGGTTTGGGATTTGGATAAAAAAGACTTTGCTGATGCTACCATTGCTAAAACCTCACCAGCACTTTTTGGGGAATACACTGCCAAAGATGGCACAAAATTAACTACTGCTTGGACTTTGATAGCACAAGAATATTTAAGTGATAAATACTCGCTTGAAAATGCTGCTGAAGAAACTGGCATTGCTGCTGCTGATATTGAAAGATACGCTTTGGAAATGGCACATGTGGCGTTTAAAGAGACTATTGAGATTAACACACCTTGGACTGATTGGACTGGCAGGAAGCATGATAGCTTTATTGGGCGTCCAGTTGCTATGCATGCTATGAGAGGGATTGCAGCACATTCAAATGGTTTTAATACTTGTAGAGCAATTCATATGCTACAAGTTTTACTCGGTGCTGTTGATTGTCCGGGTAGTCATTTAGCAAAACCACCATTTCCTAGAATGATTCCACCGCCAATTAAACCAGCGAAAGAGATGGCTCCAAACACTCCGCTAAAAACTCCACCGCTAGGATTTCCAACTAGTCCAGAAGATTTAGCAATTGATAAAGATGGCAATCCTTTACGAATTGACAAGGCTTATTCATGGGACGCACCGCTTTCGGCACATGGTTTAATGCACATGGTTATCAACAACGCTGTTAAAGGCGACCCATATAAAATTGATACGCTGATTTTCTTTATGGCAAATATGGCGTGGAATTCTAGTATGAATACCGCCAATACCCAAGATATGTTGCGAGAAAAAGATGAAAACGGTGAATATAAAATTCCTAATTTGGTAGTGGTAGATGCTTTTCATAGCGAAACTGTGAATTTTGCAGACTTGGTTATCCCTGATACAACTTATCTTGAACGCCATGACACTATTTCAATTCTTGATAGACCAATTTCAGAGCCGCATATTATCGCTGATTCAATTCGCCAACCAATTATTGAGCCAGAAGGTGATACTAGGGCATGGCAAGAAGTTTTAGTAGATTTGGCAACGCGTCTTAAATTCCCAGCATTTACTAACGAAGATGGCACTGCTAAATTTAGTGGTTATCTTGATTTTGTAACCAATTGGGAAAAACATCCCGGCATTGGATTACTTGCTGGTTGGCGTGGCAAAGATGGTGAAAAGTCCGTAGTTGGTGAGCCAAATCCAAAACAATGGGAGGCCTATAAAGCCAATGAATGTTTCTTTGAAAAGCATTTACCAGACAATCAAAAATATTATCGTTTTGCCAATAAAGATTATTTAGATTACGCTGCAGAAACACATTTGAATTTTAATAATAAACCTATTGTGATGGAACTTTATAGTGAGACTTTACAGAAGTTTAACCTAGCAGGGCAGGGTTTGTATGATGGTCCTTGTCCTAGCGACAAACAAGCAAAAGAGCGTCTTGTTAAATATTGCACACCGTTTCCAGAGCATTATGAGCCACTTGAGGTTGCTAGAACCGATAAAGCAGAATATCCATTTTCCACTTGCACACAACGCCCAATGTATATGTATCATTCTTGGGATTCGCAAAATGCTTGGTTGCGTCAAATTATGGCACAAAATAAATTATTTATGAATCGCAAAAAAGCCGAGAGTATGGGTTTAATTGATGGCGATTGGGTTTGGGTTGAAAGCAAAAATGGCAAAATAAAAGTGCAAACTCAATTTATGGAAGGTTGTGAGGAAAACACTGTTTGGACTTGGAATGCTATCGGCAAACAGGCTGGTGCTTGGGGGTTAAATGAAGGTGCTGATGAAAGTAAAAAAGGCTTTTTGTTAAATCATCTGATTAGTGAGTTATTACCAAAACTTGATGACGCTCGTGAAATGACAAATTCAGATCCTGTAACAGGTCAAGCAGCTTGGTATGATACTAGGCAATGGAATACTTCTGGCACAACTGGGGCATTAACTGATGAAAACCCTTATGATGCCGAACCTAATGGCGTGTTTTTTAATCGCATTCGCCATTATGAAGCAGGTGATTATCCAAATTCTAAAACTGTGAATTTTCCTATGTCTTGTATGCATTGTGAAGATGCTGCTTGTGTTACAGTTTGTCCTACTGGTGCTAGTTATAAACGCAAAGAAGATGGTATTGTTTTGGTGGATCAAGATAAATGTATGGGTTGTAATTATTGCTCTTGGGCTTGTCCTTATGGTGCGCGTGAATTAGACACTCAGAGTGGCACGATGAAAAAATGCACACTTTGTATTGACAGAATTTATGATGAGCGTTTGGAAGTGGTGGATAGACAACCAACTTGCGTGATAACTTGTCCTGCTGGGGCGCGTCATTTTGGTGATTTTAATGATGAAAATTCTAATGTTGCAACTTTGGTGAGAGAGCGAGGCGGCAATGGTTTATTGAATGATTTGGGTTATAATCCAACCAATCAATATTTACCACCACGAGAACTTAAAACTTATAAACAAGCAGAACGCAAACCAAATCTTTTGGATAAAGTTAAAGATTGGGCTAATGAAATTATCGTTAAATAA

Transcript

Acti_006362-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00384	Molybdopterin	Molybdopterin oxidoreductase	Family	Interproscan
PF01568	Molydop_binding	Molydopterin dinucleotide binding domain	Domain	Interproscan
PF04879	Molybdop_Fe4S4	Molybdopterin oxidoreductase Fe4S4 domain	Domain	Interproscan
PF13247	Fer4_11	4Fe-4S dicluster domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006656	Domain	Molybdopterin oxidoreductase	Interproscan
IPR006657	Domain	Molybdopterin dinucleotide-binding domain	Interproscan
IPR006963	Domain	Molybdopterin oxidoreductase, 4Fe-4S domain	Interproscan
IPR009010	Homologous_superfamily	Aspartate decarboxylase-like domain superfamily	Interproscan
IPR017896	Domain	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Interproscan
IPR017900	Conserved_site	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43598	TUNGSTEN-CONTAINING FORMYLMETHANOFURAN DEHYDROGENASE 2 SUBUNIT B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0043546	Molecular Function	molybdopterin cofactor binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-