Detailed information of Acti_006322-T1 in Actinernus sp. WN-2022 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Acti_006322-T1TRANSAMIDASEScLC4GM_174464329470848-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01149Fapy_DNA_glycoFormamidopyrimidine-DNA glycosylase N-terminal domainDomainInterproscan
PF01425AmidaseAmidaseFamilyInterproscan
PF01761DHQ_synthase3-dehydroquinate synthaseDomainInterproscan
PF06831H2THFormamidopyrimidine-DNA glycosylase H2TH domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000120FamilyAmidaseInterproscan
IPR004412FamilyGlutamyl-tRNA(Gln) amidotransferase A subunitInterproscan
IPR010979Homologous_superfamilySmall ribosomal subunit protein uS13-like, H2THInterproscan
IPR012319DomainFormamidopyrimidine-DNA glycosylase, catalytic domainInterproscan
IPR015886DomainDNA glycosylase/AP lyase, H2TH DNA-bindingInterproscan
IPR016037Domain3-dehydroquinate synthase AroBInterproscan
IPR020556Conserved_siteAmidase, conserved siteInterproscan
IPR020629FamilyFormamidopyrimidine-DNA glycosylaseInterproscan
IPR023631DomainAmidase signature domainInterproscan
IPR030960Domain3-dehydroquinate synthase domainInterproscan
IPR035937Homologous_superfamilyMutM-like, N-terminalInterproscan
IPR036928Homologous_superfamilyAmidase signature (AS) superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11895TRANSAMIDASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003856Molecular Function3-dehydroquinate synthase activityInterproscan
GO:0003906Molecular FunctionDNA-(apurinic or apyrimidinic site) endonuclease activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0008534Molecular Functionoxidized purine nucleobase lesion DNA N-glycosylase activityInterproscan
GO:0009073Biological Processaromatic amino acid family biosynthetic processInterproscan
GO:0016799Molecular Functionhydrolase activity, hydrolyzing N-glycosyl compoundsInterproscan
GO:0019104Molecular FunctionDNA N-glycosylase activityInterproscan
GO:0030956Cellular Componentglutamyl-tRNA(Gln) amidotransferase complexInterproscan
GO:0050567Molecular Functionglutaminyl-tRNA synthase (glutamine-hydrolyzing) activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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