Detailed information of Acti_006273-T1 in Actinernus sp. WN-2022 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Acti_006273-T1RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBERScLC4GM_174141449148203+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00140Sigma70_r1_2Sigma-70 factor, region 1.2FamilyInterproscan
PF03979Sigma70_r1_1Sigma-70 factor, region 1.1FamilyInterproscan
PF04539Sigma70_r3Sigma-70 region 3FamilyInterproscan
PF04542Sigma70_r2Sigma-70 region 2 DomainInterproscan
PF04545Sigma70_r4Sigma-70, region 4DomainInterproscan
PF13793Pribosyltran_NN-terminal domain of ribose phosphate pyrophosphokinaseDomainInterproscan
PF14572Pribosyl_synthPhosphoribosyl synthetase-associated domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000836DomainPhosphoribosyltransferase domainInterproscan
IPR000842Conserved_sitePhosphoribosyl pyrophosphate synthetase, conserved siteInterproscan
IPR000943DomainRNA polymerase sigma-70Interproscan
IPR005946FamilyRibose-phosphate pyrophosphokinaseInterproscan
IPR007127DomainRNA polymerase sigma factor 70, region 1.1Interproscan
IPR007624DomainRNA polymerase sigma-70 region 3Interproscan
IPR007627DomainRNA polymerase sigma-70 region 2Interproscan
IPR007630DomainRNA polymerase sigma-70 region 4Interproscan
IPR009042DomainRNA polymerase sigma-70 region 1.2Interproscan
IPR013324Homologous_superfamilyRNA polymerase sigma factor, region 3/4-likeInterproscan
IPR013325Homologous_superfamilyRNA polymerase sigma factor, region 2Interproscan
IPR014284DomainRNA polymerase sigma-70 like domainInterproscan
IPR028630FamilyRNA polymerase sigma factor RpoDInterproscan
IPR029057Homologous_superfamilyPhosphoribosyltransferase-likeInterproscan
IPR029099DomainRibose-phosphate pyrophosphokinase, N-terminal domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR042189Homologous_superfamilySigma-70 factor, region 1.1 superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10210RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0002189Cellular Componentribose phosphate diphosphokinase complexInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0004749Molecular Functionribose phosphate diphosphokinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006015Biological Process5-phosphoribose 1-diphosphate biosynthetic processInterproscan
GO:0006164Biological Processpurine nucleotide biosynthetic processInterproscan
GO:0006352Biological ProcessDNA-templated transcription initiationInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0009156Biological Processribonucleoside monophosphate biosynthetic processInterproscan
GO:0009165Biological Processnucleotide biosynthetic processInterproscan
GO:0016987Molecular Functionsigma factor activityInterproscan
GO:0044249Biological Processobsolete cellular biosynthetic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP